RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	MRX4	Q12467	430 aa		0.28	□□□□□ -2.37
RCO1	YMR075W	UBA3	Q99344	299 aa		0.28	□□□□□ -2.37
RCO1	YMR075W	VPS63	O13549	108 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	ADE4	P04046	510 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	RPL6B	P05739	176 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	RNA1	P11745	407 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	UNG1	P12887	359 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	CUP2	P15315	225 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	PHA2	P32452	334 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	ECM14	P38836	430 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	FHL1	P39521	936 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	RBG1	P39729	369 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	VHS2	P40463	436 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	UFE1	P41834	346 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	ZIM17	P42844	174 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	MOB2	P43563	287 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	CTK3	P46963	296 aa	Predicted RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	YJL144W	P47009	104 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	AIM23	P47015	356 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	ASN2	P49090	572 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	SHE4	P51534	789 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	CAX4	P53223	239 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	PRM1	P53835	661 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	RPL6A	Q02326	176 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	YPL080C	Q02826	108 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	YPL113C	Q02961	396 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	PRP3	Q03338	469 aa	Predicted RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	ACL4	Q03771	387 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	PRP42	Q03776	544 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	RPN9	Q04062	393 aa	Known RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	MDM30	Q05930	598 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	YOL029C	Q08187	201 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	LDS2	Q08218	356 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	RKM1	Q08961	583 aa	Predicted RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	MMT2	Q08970	484 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	YPL150W	Q12152	901 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	RRG1	Q12167	365 aa	Predicted RBP	0.27	□□□□□ -2.37
RCO1	YMR075W	RGS2	Q99188	309 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	MHP1	P43638	1398 aa		0.27	□□□□□ -2.37
RCO1	YMR075W	HPR1	P17629	752 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	SAG1	P20840	650 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ROX1	P25042	368 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	RBK1	P25332	333 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	RRP7	P25368	297 aa	Predicted RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	TKL2	P33315	681 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	LTV1	P34078	463 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	PTK1	P36002	662 aa	Predicted RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	ANR2	P36090	516 aa	Predicted RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	HEL1	P36113	551 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ZTA1	P38230	334 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	SRP72	P38688	640 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	CTM1	P38818	585 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	GPI16	P38875	610 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	BDH1	P39714	382 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	EPL1	P43572	832 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	PMT5	P52867	743 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YGL118C	P53132	145 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	RPN14	P53196	417 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	RTT102	P53330	157 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ZRG17	P53735	605 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	RGM1	Q00453	211 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	SED5	Q01590	340 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	GYL1	Q04322	720 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	API2	Q04413	109 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ROY1	Q04847	553 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ARC18	Q05933	178 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	YDL121C	Q07541	149 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	PEX27	Q08580	376 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YOR376W	Q08900	122 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	VIK1	Q12045	647 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YPR063C	Q12160	140 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ATP16	Q12165	160 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	SCM3	Q12334	223 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YOL159C-A	Q3E769	90 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	TDH1	P00360	332 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	OPI3	P05375	206 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	SSC1	P0CS90	654 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	RPL23A	P0CX41	137 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	RPL23B	P0CX42	137 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	DAL5	P15365	543 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	PDX1	P16451	410 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	CPT1	P17898	393 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	INO2	P26798	304 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	TOA1	P32773	286 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	NFU1	P32860	256 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	KTI12	P34253	313 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	MPE1	P35728	441 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	MYO3	P36006	1272 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	MED8	P38304	223 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	RFC3	P38629	340 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	MNL1	P38888	796 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	FAD1	P38913	306 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	HEM14	P40012	539 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ALD5	P40047	520 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	NDE1	P40215	560 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	LYS12	P40495	371 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	IRC6	P43615	237 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	CPR7	P47103	393 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	DSK2	P48510	373 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	NAS6	P50086	228 aa		0.26	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms