RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W IMA4P0CW41 589 aa1.5□□□□□ -2.17
HIT1YJR055W MNE1P24720 663 aa1.5□□□□□ -2.17
HIT1YJR055W SLM5P25345 492 aaKnown RBP1.5□□□□□ -2.17
HIT1YJR055W URA7P28274 579 aaKnown RBP1.5□□□□□ -2.17
HIT1YJR055W VMA8P32610 256 aaKnown RBP1.5□□□□□ -2.17
HIT1YJR055W PEX5P35056 612 aa1.5□□□□□ -2.17
HIT1YJR055W RRP46P53256 223 aaPredicted RBP1.5□□□□□ -2.17
HIT1YJR055W RPT4P53549 437 aaKnown RBP1.5□□□□□ -2.17
HIT1YJR055W STD1Q02794 444 aa1.5□□□□□ -2.17
HIT1YJR055W YMR010WQ03687 405 aa1.5□□□□□ -2.17
HIT1YJR055W PRM6Q04705 352 aa1.5□□□□□ -2.17
HIT1YJR055W IMA2Q08295 589 aa1.5□□□□□ -2.17
HIT1YJR055W PGA3Q12746 312 aaKnown RBP1.5□□□□□ -2.17
HIT1YJR055W RRP5Q05022 1729 aaKnown RBP1.49□□□□□ -2.17
HIT1YJR055W ATP1P07251 545 aaKnown RBP1.49□□□□□ -2.17
HIT1YJR055W DST1P07273 309 aa1.49□□□□□ -2.17
HIT1YJR055W CMK2P22517 447 aa1.49□□□□□ -2.17
HIT1YJR055W SKN1P33336 771 aa1.49□□□□□ -2.17
HIT1YJR055W OLA1P38219 394 aaKnown RBP1.49□□□□□ -2.17
HIT1YJR055W ZTA1P38230 334 aaKnown RBP1.49□□□□□ -2.17
HIT1YJR055W MMF1P40185 145 aaKnown RBP1.49□□□□□ -2.17
HIT1YJR055W TOS3P43637 560 aa1.49□□□□□ -2.17
HIT1YJR055W YJL055WP47044 245 aa1.49□□□□□ -2.17
HIT1YJR055W TRM112P53738 135 aaPredicted RBP1.49□□□□□ -2.17
HIT1YJR055W SPR6Q01684 191 aa1.49□□□□□ -2.17
HIT1YJR055W YLR345WQ06137 509 aa1.49□□□□□ -2.17
HIT1YJR055W MMR1Q06324 491 aa1.49□□□□□ -2.17
HIT1YJR055W GPM3Q12326 303 aa1.49□□□□□ -2.17
HIT1YJR055W NCA2Q12374 616 aa1.49□□□□□ -2.17
HIT1YJR055W ERP4Q12450 207 aa1.49□□□□□ -2.17
HIT1YJR055W CAT8P39113 1433 aa1.49□□□□□ -2.17
HIT1YJR055W PHO91P27514 894 aa1.48□□□□□ -2.17
HIT1YJR055W HSP104P31539 908 aaKnown RBP1.48□□□□□ -2.17
HIT1YJR055W DOA1P36037 715 aa1.48□□□□□ -2.17
HIT1YJR055W HEL1P36113 551 aa1.48□□□□□ -2.17
HIT1YJR055W ASC1P38011 319 aaKnown RBP1.48□□□□□ -2.17
HIT1YJR055W KAP104P38217 918 aaKnown RBP1.48□□□□□ -2.17
HIT1YJR055W ECM8P38246 354 aa1.48□□□□□ -2.17
HIT1YJR055W FAD1P38913 306 aa1.48□□□□□ -2.17
HIT1YJR055W GDI1P39958 451 aaKnown RBP1.48□□□□□ -2.17
HIT1YJR055W GAT2P40209 560 aa1.48□□□□□ -2.17
HIT1YJR055W ATM1P40416 690 aa1.48□□□□□ -2.17
HIT1YJR055W BUD27P43573 796 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
HIT1YJR055W COQ5P49017 307 aa1.48□□□□□ -2.17
HIT1YJR055W HST4P53688 370 aa1.48□□□□□ -2.17
HIT1YJR055W FCY22Q12119 530 aa1.48□□□□□ -2.17
HIT1YJR055W YCR024C-BQ3E7Z8 88 aa1.48□□□□□ -2.17
HIT1YJR055W IRA1P18963 3092 aa1.48□□□□□ -2.17
HIT1YJR055W URB1P34241 1764 aaKnown RBP1.47□□□□□ -2.17
HIT1YJR055W FKS3Q04952 1785 aa1.47□□□□□ -2.17
HIT1YJR055W POM152P39685 1337 aa1.47□□□□□ -2.17
HIT1YJR055W ADE4P04046 510 aaKnown RBP1.47□□□□□ -2.17
HIT1YJR055W STE7P06784 515 aa1.47□□□□□ -2.17
HIT1YJR055W NIP1P32497 812 aaKnown RBP1.47□□□□□ -2.17
HIT1YJR055W PDC2P32896 925 aa1.47□□□□□ -2.17
HIT1YJR055W LTV1P34078 463 aa1.47□□□□□ -2.17
HIT1YJR055W INM1P38710 295 aa1.47□□□□□ -2.17
HIT1YJR055W PEX22P39718 180 aa1.47□□□□□ -2.17
HIT1YJR055W VHS2P40463 436 aa1.47□□□□□ -2.17
HIT1YJR055W YIR035CP40579 254 aa1.47□□□□□ -2.17
HIT1YJR055W LCB2P40970 561 aa1.47□□□□□ -2.17
HIT1YJR055W TCB2P48231 1178 aa1.47□□□□□ -2.17
HIT1YJR055W VPS9P54787 451 aa1.47□□□□□ -2.17
HIT1YJR055W ERO1Q03103 563 aa1.47□□□□□ -2.17
HIT1YJR055W ENT5Q03769 411 aaKnown RBP1.47□□□□□ -2.17
HIT1YJR055W PRP42Q03776 544 aaKnown RBP1.47□□□□□ -2.17
HIT1YJR055W YDR131CQ03899 556 aa1.47□□□□□ -2.17
HIT1YJR055W YDL114WQ07530 308 aa1.47□□□□□ -2.17
HIT1YJR055W YDL199CQ12407 687 aa1.47□□□□□ -2.17
HIT1YJR055W YOL085CQ99345 113 aa1.47□□□□□ -2.17
HIT1YJR055W TOR2P32600 2474 aaKnown RBP1.47□□□□□ -2.17
HIT1YJR055W STH1P32597 1359 aa1.47□□□□□ -2.17
HIT1YJR055W ARO3P14843 370 aaKnown RBP1.46□□□□□ -2.18
HIT1YJR055W FUN26P31381 517 aa1.46□□□□□ -2.18
HIT1YJR055W MDL1P33310 695 aa1.46□□□□□ -2.18
HIT1YJR055W YBL028CP38202 106 aa1.46□□□□□ -2.18
HIT1YJR055W SER3P40054 469 aa1.46□□□□□ -2.18
HIT1YJR055W YML6P51998 286 aa1.46□□□□□ -2.18
HIT1YJR055W SEH1P53011 349 aaKnown RBP1.46□□□□□ -2.18
HIT1YJR055W ROG1P53118 685 aa1.46□□□□□ -2.18
HIT1YJR055W RSC1P53236 928 aa1.46□□□□□ -2.18
HIT1YJR055W SPE3Q12074 293 aaKnown RBP1.46□□□□□ -2.18
HIT1YJR055W RUP1Q12242 671 aa1.46□□□□□ -2.18
HIT1YJR055W PAR32Q12515 295 aaKnown RBP1.46□□□□□ -2.18
HIT1YJR055W ISN1Q99312 450 aa1.46□□□□□ -2.18
HIT1YJR055W RPL6BP05739 176 aaKnown RBP1.45□□□□□ -2.18
HIT1YJR055W TPK3P05986 398 aa1.45□□□□□ -2.18
HIT1YJR055W ARF1P11076 181 aaKnown RBP1.45□□□□□ -2.18
HIT1YJR055W ALG1P16661 449 aa1.45□□□□□ -2.18
HIT1YJR055W GIT1P25346 518 aa1.45□□□□□ -2.18
HIT1YJR055W NRP1P32770 719 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
HIT1YJR055W RAD5P32849 1169 aaPredicted RBP1.45□□□□□ -2.18
HIT1YJR055W SOL2P37262 315 aa1.45□□□□□ -2.18
HIT1YJR055W MNL1P38888 796 aa1.45□□□□□ -2.18
HIT1YJR055W EPL1P43572 832 aa1.45□□□□□ -2.18
HIT1YJR055W AIP1P46680 615 aaKnown RBP1.45□□□□□ -2.18
HIT1YJR055W RPL6AQ02326 176 aaKnown RBP1.45□□□□□ -2.18
HIT1YJR055W RPN9Q04062 393 aaKnown RBP1.45□□□□□ -2.18
HIT1YJR055W YHC1Q05900 231 aaKnown RBP1.45□□□□□ -2.18
HIT1YJR055W MCT1Q12283 360 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms