RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YLH47Q06493 454 aa1.87□□□□□ -2.11
SMD1YGR074W CMS1Q07897 291 aaKnown RBP1.87□□□□□ -2.11
SMD1YGR074W SLF1Q12034 447 aaKnown RBP1.87□□□□□ -2.11
SMD1YGR074W YDR262WQ12331 272 aa1.87□□□□□ -2.11
SMD1YGR074W YPR1Q12458 312 aa1.87□□□□□ -2.11
SMD1YGR074W SPO24Q3E752 67 aa1.87□□□□□ -2.11
SMD1YGR074W NAG1Q8TGN9 163 aa1.87□□□□□ -2.11
SMD1YGR074W UBA3Q99344 299 aa1.87□□□□□ -2.11
SMD1YGR074W VPS63O13549 108 aa1.86□□□□□ -2.11
SMD1YGR074W CBP2P03874 630 aaPredicted RBP1.86□□□□□ -2.11
SMD1YGR074W GAL7P08431 366 aa1.86□□□□□ -2.11
SMD1YGR074W RPS18AP0CX55 146 aaKnown RBP1.86□□□□□ -2.11
SMD1YGR074W RPS18BP0CX56 146 aaPredicted RBP1.86□□□□□ -2.11
SMD1YGR074W TOA2P32774 122 aa1.86□□□□□ -2.11
SMD1YGR074W CSE2P33308 149 aa1.86□□□□□ -2.11
SMD1YGR074W SPO23P33757 523 aa1.86□□□□□ -2.11
SMD1YGR074W MYO3P36006 1272 aa1.86□□□□□ -2.11
SMD1YGR074W COS9P36034 407 aa1.86□□□□□ -2.11
SMD1YGR074W RRF1P38771 230 aa1.86□□□□□ -2.11
SMD1YGR074W MNN9P39107 395 aaKnown RBP1.86□□□□□ -2.11
SMD1YGR074W FHL1P39521 936 aa1.86□□□□□ -2.11
SMD1YGR074W BTT1P40314 149 aaPredicted RBP1.86□□□□□ -2.11
SMD1YGR074W GPI8P49018 411 aa1.86□□□□□ -2.11
SMD1YGR074W PRO2P54885 456 aaKnown RBP1.86□□□□□ -2.11
SMD1YGR074W EGD1Q02642 157 aaKnown RBP1.86□□□□□ -2.11
SMD1YGR074W CAB5Q03941 241 aa1.86□□□□□ -2.11
SMD1YGR074W VPS20Q04272 221 aa1.86□□□□□ -2.11
SMD1YGR074W GAS2Q06135 555 aa1.86□□□□□ -2.11
SMD1YGR074W TMS1Q12116 473 aa1.86□□□□□ -2.11
SMD1YGR074W HIF1Q12373 385 aa1.86□□□□□ -2.11
SMD1YGR074W IZH2Q12442 317 aa1.86□□□□□ -2.11
SMD1YGR074W AIM45Q12480 344 aaKnown RBP1.86□□□□□ -2.11
SMD1YGR074W RPS8AP0CX39 200 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W RPS8BP0CX40 200 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W RPL18AP0CX49 186 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W RPL18BP0CX50 186 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W AAT2P23542 418 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W RVS161P25343 265 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W MRPS5P33759 307 aa1.85□□□□□ -2.11
SMD1YGR074W MRPL40P36534 297 aa1.85□□□□□ -2.11
SMD1YGR074W PCH2P38126 564 aa1.85□□□□□ -2.11
SMD1YGR074W AVT5P38176 459 aa1.85□□□□□ -2.11
SMD1YGR074W IML3P38265 245 aa1.85□□□□□ -2.11
SMD1YGR074W SWC5P38326 303 aa1.85□□□□□ -2.11
SMD1YGR074W LSM12P38828 187 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W AIM10P39965 576 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W UTP25P40498 721 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W SHY1P53266 389 aa1.85□□□□□ -2.11
SMD1YGR074W YGR168CP53293 376 aa1.85□□□□□ -2.11
SMD1YGR074W CRH1P53301 507 aa1.85□□□□□ -2.11
SMD1YGR074W HCH1P53834 153 aa1.85□□□□□ -2.11
SMD1YGR074W ABZ2Q03266 374 aa1.85□□□□□ -2.11
SMD1YGR074W YMR111CQ04461 462 aaPredicted RBP1.85□□□□□ -2.11
SMD1YGR074W LIP2Q06005 328 aa1.85□□□□□ -2.11
SMD1YGR074W GAT3Q07928 141 aa1.85□□□□□ -2.11
SMD1YGR074W DNL4Q08387 944 aaPredicted RBP1.85□□□□□ -2.11
SMD1YGR074W RRG7Q08774 242 aaPredicted RBP1.85□□□□□ -2.11
SMD1YGR074W YDL109CQ12103 647 aa1.85□□□□□ -2.11
SMD1YGR074W WTM1Q12363 437 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W YDL199CQ12407 687 aa1.85□□□□□ -2.11
SMD1YGR074W DET1Q99288 334 aaKnown RBP1.85□□□□□ -2.11
SMD1YGR074W HEM4P06174 275 aa1.84□□□□□ -2.11
SMD1YGR074W STE7P06784 515 aa1.84□□□□□ -2.11
SMD1YGR074W RPS16AP0CX51 143 aaKnown RBP1.84□□□□□ -2.11
SMD1YGR074W RPS16BP0CX52 143 aaKnown RBP1.84□□□□□ -2.11
SMD1YGR074W PUT4P15380 627 aa1.84□□□□□ -2.11
SMD1YGR074W LDS1P31379 325 aa1.84□□□□□ -2.11
SMD1YGR074W FUN26P31381 517 aa1.84□□□□□ -2.11
SMD1YGR074W ACB1P31787 87 aa1.84□□□□□ -2.11
SMD1YGR074W YPS1P32329 569 aa1.84□□□□□ -2.11
SMD1YGR074W MEI5P32489 222 aa1.84□□□□□ -2.11
SMD1YGR074W MKK1P32490 508 aa1.84□□□□□ -2.11
SMD1YGR074W OXA1P39952 402 aa1.84□□□□□ -2.11
SMD1YGR074W AIM20P40451 204 aa1.84□□□□□ -2.11
SMD1YGR074W EGT2P42835 1041 aa1.84□□□□□ -2.11
SMD1YGR074W LOH1P47055 219 aa1.84□□□□□ -2.11
SMD1YGR074W TAF6P53040 516 aa1.84□□□□□ -2.11
SMD1YGR074W COS1P53822 381 aa1.84□□□□□ -2.11
SMD1YGR074W YMR027WQ04371 470 aa1.84□□□□□ -2.11
SMD1YGR074W FSH2Q05015 223 aa1.84□□□□□ -2.11
SMD1YGR074W MSC3Q05812 728 aa1.84□□□□□ -2.11
SMD1YGR074W YLR413WQ06689 675 aa1.84□□□□□ -2.11
SMD1YGR074W SAM4Q08985 325 aaKnown RBP1.84□□□□□ -2.11
SMD1YGR074W DCP1Q12517 231 aaPredicted RBP1.84□□□□□ -2.11
SMD1YGR074W STE2D6VTK4 431 aa1.83□□□□□ -2.12
SMD1YGR074W RAD7P06779 565 aa1.83□□□□□ -2.12
SMD1YGR074W FAR1P21268 830 aa1.83□□□□□ -2.12
SMD1YGR074W UTR1P21373 530 aa1.83□□□□□ -2.12
SMD1YGR074W GIT1P25346 518 aa1.83□□□□□ -2.12
SMD1YGR074W DCC1P25559 380 aa1.83□□□□□ -2.12
SMD1YGR074W ICL1P28240 557 aaPredicted RBP1.83□□□□□ -2.12
SMD1YGR074W ERG9P29704 444 aa1.83□□□□□ -2.12
SMD1YGR074W DEP1P31385 405 aa1.83□□□□□ -2.12
SMD1YGR074W ZUO1P32527 433 aaKnown RBP1.83□□□□□ -2.12
SMD1YGR074W YKL071WP36086 256 aa1.83□□□□□ -2.12
SMD1YGR074W SOL2P37262 315 aa1.83□□□□□ -2.12
SMD1YGR074W IST2P38250 946 aa1.83□□□□□ -2.12
SMD1YGR074W PEX32P38292 413 aa1.83□□□□□ -2.12
SMD1YGR074W MMS21P38632 267 aa1.83□□□□□ -2.12
SMD1YGR074W WSC4P38739 605 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms