RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W RPP1P38786 293 aa3.83□□□□□ -1.8
UBP6YFR010W CYC2P38909 366 aa3.83□□□□□ -1.8
UBP6YFR010W ELO1P39540 310 aa3.83□□□□□ -1.8
UBP6YFR010W BTT1P40314 149 aaPredicted RBP3.83□□□□□ -1.8
UBP6YFR010W YIR016WP40572 265 aa3.83□□□□□ -1.8
UBP6YFR010W YFR057WP43625 151 aa3.83□□□□□ -1.8
UBP6YFR010W YJR141WP47172 347 aaPredicted RBP3.83□□□□□ -1.8
UBP6YFR010W GND2P53319 492 aa3.83□□□□□ -1.8
UBP6YFR010W KTR5P53966 522 aaPredicted RBP3.83□□□□□ -1.8
UBP6YFR010W RVB1Q03940 463 aaKnown RBP3.83□□□□□ -1.8
UBP6YFR010W YMR087WQ04299 284 aa3.83□□□□□ -1.8
UBP6YFR010W YET3Q07451 203 aa3.83□□□□□ -1.8
UBP6YFR010W YOR289WQ12012 251 aaPredicted RBP3.83□□□□□ -1.8
UBP6YFR010W TMS1Q12116 473 aa3.83□□□□□ -1.8
UBP6YFR010W WTM1Q12363 437 aaKnown RBP3.83□□□□□ -1.8
UBP6YFR010W PPR1P07272 904 aaPredicted RBP3.82□□□□□ -1.8
UBP6YFR010W MRP1P10662 321 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W MSK1P32048 576 aa3.82□□□□□ -1.8
UBP6YFR010W CLG1P35190 452 aa3.82□□□□□ -1.8
UBP6YFR010W YPT53P36019 220 aa3.82□□□□□ -1.8
UBP6YFR010W ECM8P38246 354 aa3.82□□□□□ -1.8
UBP6YFR010W VBA2P38358 474 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W IKI1P38874 309 aa3.82□□□□□ -1.8
UBP6YFR010W HAT2P39984 401 aa3.82□□□□□ -1.8
UBP6YFR010W MMF1P40185 145 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W YMR134WP40207 237 aa3.82□□□□□ -1.8
UBP6YFR010W GAT2P40209 560 aa3.82□□□□□ -1.8
UBP6YFR010W ALG8P40351 577 aa3.82□□□□□ -1.8
UBP6YFR010W PRM10P42946 383 aa3.82□□□□□ -1.8
UBP6YFR010W QRI1P43123 477 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W COS4P43542 379 aa3.82□□□□□ -1.8
UBP6YFR010W HOC1P47124 396 aa3.82□□□□□ -1.8
UBP6YFR010W LYS20P48570 428 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W NQM1P53228 333 aaPredicted RBP3.82□□□□□ -1.8
UBP6YFR010W YGR168CP53293 376 aa3.82□□□□□ -1.8
UBP6YFR010W BIO4P53630 237 aa3.82□□□□□ -1.8
UBP6YFR010W TEX1P53851 422 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W YLR460CP54007 376 aa3.82□□□□□ -1.8
UBP6YFR010W ASI1P54074 624 aa3.82□□□□□ -1.8
UBP6YFR010W YMR178WQ03219 274 aaKnown RBP3.82□□□□□ -1.8
UBP6YFR010W CSM3Q04659 317 aa3.82□□□□□ -1.8
UBP6YFR010W YPR022CQ12139 1133 aa3.82□□□□□ -1.8
UBP6YFR010W YPL150WQ12152 901 aa3.82□□□□□ -1.8
UBP6YFR010W CHO2P05374 869 aaKnown RBP3.81□□□□□ -1.8
UBP6YFR010W SIR3P06701 978 aa3.81□□□□□ -1.8
UBP6YFR010W ALG7P07286 448 aa3.81□□□□□ -1.8
UBP6YFR010W PUT1P09368 476 aa3.81□□□□□ -1.8
UBP6YFR010W ASP3-2P0CX77 362 aa3.81□□□□□ -1.8
UBP6YFR010W ASP3-3P0CX78 362 aa3.81□□□□□ -1.8
UBP6YFR010W ASP3-4P0CX79 362 aa3.81□□□□□ -1.8
UBP6YFR010W ASP3-1P0CZ17 362 aa3.81□□□□□ -1.8
UBP6YFR010W ATP10P18496 279 aa3.81□□□□□ -1.8
UBP6YFR010W PPZ1P26570 692 aa3.81□□□□□ -1.8
UBP6YFR010W GAC1P28006 793 aa3.81□□□□□ -1.8
UBP6YFR010W TCA17P32613 152 aa3.81□□□□□ -1.8
UBP6YFR010W IES6P32617 166 aa3.81□□□□□ -1.8
UBP6YFR010W RRN10P38204 145 aa3.81□□□□□ -1.8
UBP6YFR010W ICS2P38284 255 aa3.81□□□□□ -1.8
UBP6YFR010W STP2P38704 541 aa3.81□□□□□ -1.8
UBP6YFR010W INM1P38710 295 aa3.81□□□□□ -1.8
UBP6YFR010W PCF11P39081 626 aaPredicted RBP3.81□□□□□ -1.8
UBP6YFR010W SEN34P39707 275 aa3.81□□□□□ -1.8
UBP6YFR010W GET2P40056 285 aa3.81□□□□□ -1.8
UBP6YFR010W LCP5P40079 357 aaPredicted RBP3.81□□□□□ -1.8
UBP6YFR010W COX15P40086 486 aa3.81□□□□□ -1.8
UBP6YFR010W RPN11P43588 306 aaKnown RBP3.81□□□□□ -1.8
UBP6YFR010W PTR3P43606 678 aa3.81□□□□□ -1.8
UBP6YFR010W SFH5P47008 294 aa3.81□□□□□ -1.8
UBP6YFR010W YJR111CP47148 283 aaKnown RBP3.81□□□□□ -1.8
UBP6YFR010W MSY1P48527 492 aa3.81□□□□□ -1.8
UBP6YFR010W SBH2P52871 88 aa3.81□□□□□ -1.8
UBP6YFR010W NIF3P53081 288 aa3.81□□□□□ -1.8
UBP6YFR010W FHN1P53279 174 aa3.81□□□□□ -1.8
UBP6YFR010W MSC1Q03104 513 aa3.81□□□□□ -1.8
UBP6YFR010W YMR206WQ03695 313 aa3.81□□□□□ -1.8
UBP6YFR010W ARO80Q04052 950 aa3.81□□□□□ -1.8
UBP6YFR010W RIF2Q06208 395 aa3.81□□□□□ -1.8
UBP6YFR010W MRI1Q06489 411 aaKnown RBP3.81□□□□□ -1.8
UBP6YFR010W BER1Q06688 274 aaKnown RBP3.81□□□□□ -1.8
UBP6YFR010W RFU1Q08003 200 aa3.81□□□□□ -1.8
UBP6YFR010W SFM1Q12314 213 aa3.81□□□□□ -1.8
UBP6YFR010W RGS2Q99188 309 aa3.81□□□□□ -1.8
UBP6YFR010W FSH3Q99369 266 aa3.81□□□□□ -1.8
UBP6YFR010W HRP1Q99383 534 aaKnown RBP3.81□□□□□ -1.8
UBP6YFR010W COR1P07256 457 aa3.8□□□□□ -1.8
UBP6YFR010W RAD24P32641 659 aa3.8□□□□□ -1.8
UBP6YFR010W RIB5P38145 238 aa3.8□□□□□ -1.8
UBP6YFR010W SDH8P38345 138 aa3.8□□□□□ -1.8
UBP6YFR010W ATG7P38862 630 aa3.8□□□□□ -1.8
UBP6YFR010W CIN4P39110 191 aa3.8□□□□□ -1.8
UBP6YFR010W MBB1P39534 108 aa3.8□□□□□ -1.8
UBP6YFR010W SLM1P40485 686 aa3.8□□□□□ -1.8
UBP6YFR010W UFE1P41834 346 aa3.8□□□□□ -1.8
UBP6YFR010W YJR054WP47114 497 aa3.8□□□□□ -1.8
UBP6YFR010W NAS6P50086 228 aa3.8□□□□□ -1.8
UBP6YFR010W YTP1P53584 459 aa3.8□□□□□ -1.8
UBP6YFR010W BUD17P53727 317 aa3.8□□□□□ -1.8
UBP6YFR010W DIG1Q03063 452 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W OST6Q03723 332 aa3.8□□□□□ -1.8
UBP6YFR010W DLT1Q04216 342 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 143.6 ms