RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C YBR138CP38277 524 aa5.4□□□□□ -1.54
MDH3YDL078C PTI1P39927 425 aaPredicted RBP5.4□□□□□ -1.54
MDH3YDL078C NOP16P40007 231 aaKnown RBP5.4□□□□□ -1.54
MDH3YDL078C RPL10P41805 221 aaKnown RBP5.4□□□□□ -1.54
MDH3YDL078C MEP2P41948 499 aa5.4□□□□□ -1.54
MDH3YDL078C AIM22P47051 409 aa5.4□□□□□ -1.54
MDH3YDL078C GTO1P48239 356 aa5.4□□□□□ -1.54
MDH3YDL078C MSE1P48525 536 aa5.4□□□□□ -1.54
MDH3YDL078C CAF40P53829 373 aa5.4□□□□□ -1.54
MDH3YDL078C ERG13P54839 491 aaKnown RBP5.4□□□□□ -1.54
MDH3YDL078C YMR279CQ03263 540 aa5.4□□□□□ -1.54
MDH3YDL078C SMP3Q04174 516 aa5.4□□□□□ -1.54
MDH3YDL078C SWF1Q04629 336 aa5.4□□□□□ -1.54
MDH3YDL078C GAD1Q04792 585 aa5.4□□□□□ -1.54
MDH3YDL078C UAF30Q08747 228 aa5.4□□□□□ -1.54
MDH3YDL078C YPL066WQ12194 479 aa5.4□□□□□ -1.54
MDH3YDL078C NTO1Q12311 748 aa5.4□□□□□ -1.54
MDH3YDL078C FMP16Q12497 93 aa5.4□□□□□ -1.54
MDH3YDL078C YCL001W-BQ96VH2 84 aa5.4□□□□□ -1.54
MDH3YDL078C URA3P03962 267 aa5.39□□□□□ -1.55
MDH3YDL078C LEU4P06208 619 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C STE7P06784 515 aa5.39□□□□□ -1.55
MDH3YDL078C CBP6P07253 162 aaPredicted RBP5.39□□□□□ -1.55
MDH3YDL078C DST1P07273 309 aa5.39□□□□□ -1.55
MDH3YDL078C PEX3P28795 441 aa5.39□□□□□ -1.55
MDH3YDL078C DBF20P32328 564 aa5.39□□□□□ -1.55
MDH3YDL078C SSE2P32590 693 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C PPQ1P32945 549 aa5.39□□□□□ -1.55
MDH3YDL078C SPO23P33757 523 aa5.39□□□□□ -1.55
MDH3YDL078C RPS27AP35997 82 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C SEA4P38164 1038 aa5.39□□□□□ -1.55
MDH3YDL078C RPS27BP38711 82 aa5.39□□□□□ -1.55
MDH3YDL078C LNP1P38878 278 aa5.39□□□□□ -1.55
MDH3YDL078C THO1P40040 218 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C GTT1P40582 234 aa5.39□□□□□ -1.55
MDH3YDL078C QRI1P43123 477 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C DBP6P53734 629 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C CUS2P53830 285 aaPredicted RBP5.39□□□□□ -1.55
MDH3YDL078C YNL010WP53981 241 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C IDP3P53982 420 aaKnown RBP5.39□□□□□ -1.55
MDH3YDL078C APC4Q04601 652 aa5.39□□□□□ -1.55
MDH3YDL078C YDR124WQ04608 324 aa5.39□□□□□ -1.55
MDH3YDL078C YLR352WQ06479 807 aa5.39□□□□□ -1.55
MDH3YDL078C ESA1Q08649 445 aa5.39□□□□□ -1.55
MDH3YDL078C MUM3Q08750 479 aa5.39□□□□□ -1.55
MDH3YDL078C YPL191CQ08930 360 aa5.39□□□□□ -1.55
MDH3YDL078C DCN1Q12395 269 aa5.39□□□□□ -1.55
MDH3YDL078C YPR064WQ12492 139 aa5.39□□□□□ -1.55
MDH3YDL078C RPN13O13563 156 aa5.38□□□□□ -1.55
MDH3YDL078C COX1P00401 534 aa5.38□□□□□ -1.55
MDH3YDL078C CAR1P00812 333 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C VPS33P20795 691 aa5.38□□□□□ -1.55
MDH3YDL078C SEC62P21825 274 aa5.38□□□□□ -1.55
MDH3YDL078C NPR1P22211 790 aa5.38□□□□□ -1.55
MDH3YDL078C DBP2P24783 546 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C SLM5P25345 492 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C NAM9P27929 486 aa5.38□□□□□ -1.55
MDH3YDL078C FAA1P30624 700 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C SPT14P32363 452 aa5.38□□□□□ -1.55
MDH3YDL078C BNA4P38169 460 aa5.38□□□□□ -1.55
MDH3YDL078C ALG14P38242 237 aa5.38□□□□□ -1.55
MDH3YDL078C COS111P38308 924 aa5.38□□□□□ -1.55
MDH3YDL078C RPS26AP39938 119 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C RPS26BP39939 119 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C YIL152WP40455 235 aa5.38□□□□□ -1.55
MDH3YDL078C IRC6P43615 237 aa5.38□□□□□ -1.55
MDH3YDL078C IKS1P47042 667 aa5.38□□□□□ -1.55
MDH3YDL078C JHD2P47156 728 aaPredicted RBP5.38□□□□□ -1.55
MDH3YDL078C MTR3P48240 250 aaPredicted RBP5.38□□□□□ -1.55
MDH3YDL078C BPL1P48445 690 aaPredicted RBP5.38□□□□□ -1.55
MDH3YDL078C BIO3P50277 480 aa5.38□□□□□ -1.55
MDH3YDL078C SNP1Q00916 300 aaPredicted RBP5.38□□□□□ -1.55
MDH3YDL078C FMN1Q03778 218 aa5.38□□□□□ -1.55
MDH3YDL078C YMR226CQ05016 267 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C BUR2Q05949 395 aa5.38□□□□□ -1.55
MDH3YDL078C BCP1Q06338 283 aa5.38□□□□□ -1.55
MDH3YDL078C YEH1Q07804 573 aa5.38□□□□□ -1.55
MDH3YDL078C GSH2Q08220 491 aa5.38□□□□□ -1.55
MDH3YDL078C FRE5Q08908 694 aa5.38□□□□□ -1.55
MDH3YDL078C AEP3Q12089 606 aa5.38□□□□□ -1.55
MDH3YDL078C REX3Q12090 404 aa5.38□□□□□ -1.55
MDH3YDL078C RPN5Q12250 445 aaKnown RBP5.38□□□□□ -1.55
MDH3YDL078C GAL1P04385 528 aa5.37□□□□□ -1.55
MDH3YDL078C RPP1AP05318 106 aaPredicted RBP5.37□□□□□ -1.55
MDH3YDL078C GAL3P13045 520 aa5.37□□□□□ -1.55
MDH3YDL078C CBS2P14905 389 aa5.37□□□□□ -1.55
MDH3YDL078C MXR2P25566 168 aa5.37□□□□□ -1.55
MDH3YDL078C ATG22P25568 528 aa5.37□□□□□ -1.55
MDH3YDL078C IDH2P28241 369 aaKnown RBP5.37□□□□□ -1.55
MDH3YDL078C CAM1P29547 415 aaKnown RBP5.37□□□□□ -1.55
MDH3YDL078C AAR2P32357 355 aaPredicted RBP5.37□□□□□ -1.55
MDH3YDL078C TFC1P32367 649 aa5.37□□□□□ -1.55
MDH3YDL078C ASF2P32448 525 aaPredicted RBP5.37□□□□□ -1.55
MDH3YDL078C NAB2P32505 525 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
MDH3YDL078C ORC2P32833 620 aa5.37□□□□□ -1.55
MDH3YDL078C FRE2P36033 711 aa5.37□□□□□ -1.55
MDH3YDL078C DOA1P36037 715 aa5.37□□□□□ -1.55
MDH3YDL078C CUE2P36075 443 aaKnown RBP5.37□□□□□ -1.55
MDH3YDL078C ARN1P38731 627 aa5.37□□□□□ -1.55
MDH3YDL078C MNN9P39107 395 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms