RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C SPC3Q12133 184 aa6.43□□□□□ -1.38
TDP1YBR223C TPO4Q12256 659 aa6.43□□□□□ -1.38
TDP1YBR223C RRP12Q12754 1228 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C YGL041W-AP0C5N3 154 aa6.43□□□□□ -1.38
TDP1YBR223C HMG1P12683 1054 aa6.43□□□□□ -1.38
TDP1YBR223C RPB5P20434 215 aa6.43□□□□□ -1.38
TDP1YBR223C SCL1P21243 252 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C DIT1P21623 536 aa6.43□□□□□ -1.38
TDP1YBR223C NPR1P22211 790 aa6.43□□□□□ -1.38
TDP1YBR223C YCR016WP25617 290 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C AHC2P25649 128 aa6.43□□□□□ -1.38
TDP1YBR223C YKL063CP35725 167 aa6.43□□□□□ -1.38
TDP1YBR223C OMA1P36163 345 aa6.43□□□□□ -1.38
TDP1YBR223C MRPL37P36532 105 aa6.43□□□□□ -1.38
TDP1YBR223C RTC2P38279 296 aa6.43□□□□□ -1.38
TDP1YBR223C CHL4P38907 458 aa6.43□□□□□ -1.38
TDP1YBR223C HPA3P39979 161 aa6.43□□□□□ -1.38
TDP1YBR223C RPS12P48589 143 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C IMO32P53219 342 aa6.43□□□□□ -1.38
TDP1YBR223C TDA7P53882 636 aaPredicted RBP6.43□□□□□ -1.38
TDP1YBR223C TIM11P81449 96 aaPredicted RBP6.43□□□□□ -1.38
TDP1YBR223C NUP116Q02630 1113 aa6.43□□□□□ -1.38
TDP1YBR223C MTQ2Q03920 221 aaPredicted RBP6.43□□□□□ -1.38
TDP1YBR223C PHO92Q06390 306 aa6.43□□□□□ -1.38
TDP1YBR223C YPR022CQ12139 1133 aa6.43□□□□□ -1.38
TDP1YBR223C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
TDP1YBR223C CYC1P00044 109 aaPredicted RBP6.42□□□□□ -1.38
TDP1YBR223C YOL162WP0CF19 215 aa6.42□□□□□ -1.38
TDP1YBR223C CBS1P14066 229 aa6.42□□□□□ -1.38
TDP1YBR223C ORC2P32833 620 aa6.42□□□□□ -1.38
TDP1YBR223C SUI1P32911 108 aaKnown RBP6.42□□□□□ -1.38
TDP1YBR223C MTC2P34246 357 aa6.42□□□□□ -1.38
TDP1YBR223C JEN1P36035 616 aa6.42□□□□□ -1.38
TDP1YBR223C SNU114P36048 1008 aaKnown RBP6.42□□□□□ -1.38
TDP1YBR223C YHR097CP38809 366 aaKnown RBP6.42□□□□□ -1.38
TDP1YBR223C YIL165CP40446 119 aa6.42□□□□□ -1.38
TDP1YBR223C RPL10P41805 221 aaKnown RBP6.42□□□□□ -1.38
TDP1YBR223C YJL049WP47048 450 aa6.42□□□□□ -1.38
TDP1YBR223C ERV29P53337 310 aa6.42□□□□□ -1.38
TDP1YBR223C CTL1Q03220 320 aaKnown RBP6.42□□□□□ -1.38
TDP1YBR223C AIM36Q03798 255 aa6.42□□□□□ -1.38
TDP1YBR223C YDL176WQ12027 708 aa6.42□□□□□ -1.38
TDP1YBR223C YOR283WQ12040 230 aaKnown RBP6.42□□□□□ -1.38
TDP1YBR223C BAG7Q12128 409 aa6.42□□□□□ -1.38
TDP1YBR223C YOL114CQ12322 202 aa6.42□□□□□ -1.38
TDP1YBR223C NAG1Q8TGN9 163 aa6.42□□□□□ -1.38
TDP1YBR223C YOR019WQ99248 730 aa6.42□□□□□ -1.38
TDP1YBR223C FLP1P03870 423 aa6.41□□□□□ -1.38
TDP1YBR223C RPS14AP06367 137 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C RED1P14291 827 aa6.41□□□□□ -1.38
TDP1YBR223C PRP28P23394 588 aa6.41□□□□□ -1.38
TDP1YBR223C PRE7P23724 241 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C MGR1P25573 417 aa6.41□□□□□ -1.38
TDP1YBR223C THI4P32318 326 aa6.41□□□□□ -1.38
TDP1YBR223C PUB1P32588 453 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
TDP1YBR223C MSN2P33748 704 aa6.41□□□□□ -1.38
TDP1YBR223C TMA19P35691 167 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C OAR1P35731 278 aa6.41□□□□□ -1.38
TDP1YBR223C SHE2P36068 246 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
TDP1YBR223C YKL077WP36081 392 aa6.41□□□□□ -1.38
TDP1YBR223C RPS14BP39516 138 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C GID8P40208 455 aa6.41□□□□□ -1.38
TDP1YBR223C TED1P40533 473 aa6.41□□□□□ -1.38
TDP1YBR223C TOS2P50078 622 aa6.41□□□□□ -1.38
TDP1YBR223C YGR250CP53316 781 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C MSS11Q03825 758 aa6.41□□□□□ -1.38
TDP1YBR223C PLM2Q04383 521 aa6.41□□□□□ -1.38
TDP1YBR223C YMR315WQ04869 349 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C MLC2Q06580 163 aa6.41□□□□□ -1.38
TDP1YBR223C SYO1Q07395 620 aa6.41□□□□□ -1.38
TDP1YBR223C HTZ1Q12692 134 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C HAA1Q12753 694 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C RPS21BQ3E754 87 aaKnown RBP6.41□□□□□ -1.38
TDP1YBR223C YLR099W-AQ3E798 87 aa6.41□□□□□ -1.38
TDP1YBR223C YBR298C-AQ8TGK4 73 aa6.41□□□□□ -1.38
TDP1YBR223C CET1O13297 549 aaPredicted RBP6.4□□□□□ -1.38
TDP1YBR223C RAD52P06778 471 aaKnown RBP6.4□□□□□ -1.38
TDP1YBR223C PEP4P07267 405 aaKnown RBP6.4□□□□□ -1.38
TDP1YBR223C SPS2P08459 502 aa6.4□□□□□ -1.38
TDP1YBR223C RPS18AP0CX55 146 aaKnown RBP6.4□□□□□ -1.38
TDP1YBR223C RPS18BP0CX56 146 aaPredicted RBP6.4□□□□□ -1.38
TDP1YBR223C PET54P10834 293 aa6.4□□□□□ -1.38
TDP1YBR223C SEC12P11655 471 aa6.4□□□□□ -1.38
TDP1YBR223C FUS1P11710 512 aa6.4□□□□□ -1.38
TDP1YBR223C ERD1P16151 362 aa6.4□□□□□ -1.38
TDP1YBR223C PHO80P20052 293 aa6.4□□□□□ -1.38
TDP1YBR223C MCK1P21965 375 aaKnown RBP6.4□□□□□ -1.38
TDP1YBR223C SLY41P22215 453 aa6.4□□□□□ -1.38
TDP1YBR223C FPS1P23900 669 aa6.4□□□□□ -1.38
TDP1YBR223C PUP1P25043 261 aa6.4□□□□□ -1.38
TDP1YBR223C YCR100CP25606 316 aa6.4□□□□□ -1.38
TDP1YBR223C BUB3P26449 341 aa6.4□□□□□ -1.38
TDP1YBR223C SNC1P31109 117 aa6.4□□□□□ -1.38
TDP1YBR223C FUN26P31381 517 aa6.4□□□□□ -1.38
TDP1YBR223C SKN1P33336 771 aa6.4□□□□□ -1.38
TDP1YBR223C PET112P33893 541 aa6.4□□□□□ -1.38
TDP1YBR223C SDS22P36047 338 aa6.4□□□□□ -1.38
TDP1YBR223C EHT1P38295 451 aa6.4□□□□□ -1.38
TDP1YBR223C ECM34P38728 170 aa6.4□□□□□ -1.38
TDP1YBR223C VMA7P39111 118 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms