RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 C2orf69Q8N8R5 385 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 SLC35G2Q8TBE7 412 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 LMBR1Q8WVP7 490 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 FBXW5Q969U6 566 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 NAP1L4Q99733 375 aaKnown RBP5.7□□□□□ -1.5
CDRT1-208ENST00000630868 SLC12A9Q9BXP2 914 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 HDAC8Q9BY41 377 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 LUZP4Q9P127 313 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 NSD3Q9BZ95 1437 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 UBR3Q6ZT12 1888 aa5.7□□□□□ -1.5
CDRT1-208ENST00000630868 PALLDQ8WX93 1383 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 C4BP0C0L5 1744 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 KLHL33A6NCF5 533 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 DVL2O14641 736 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 TPP1O14773 563 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 NBNO60934 754 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 HOXB4P17483 251 aaPredicted RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 VCAM1P19320 739 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SLC9A1P19634 815 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SEPHS1P49903 392 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 FXR1P51114 621 aaKnown RBP eCLIP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 PHC1P78364 1004 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 ST5P78524 1137 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SMAD3P84022 425 aaKnown RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 KRT76Q01546 638 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SRSF11Q05519 484 aaKnown RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 FOXD4Q12950 439 aaPredicted RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 STK3Q13188 491 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 CDK5R2Q13319 367 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 ACAP2Q15057 778 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 PDCD1Q15116 288 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SMAD2Q15796 467 aaKnown RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 TRAPPC3LQ5T215 181 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 RCSD1Q6JBY9 416 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 CDPF1Q6NVV7 123 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 CATIPQ7Z7H3 387 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 RASSF3Q86WH2 238 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SKAP1Q86WV1 359 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 KSR1Q8IVT5 923 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 AMOTL1Q8IY63 956 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 IFNL2Q8IZJ0 200 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 TOP6BLQ8N6T0 577 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 ANKRD42Q8N9B4 389 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 ZBTB34Q8NCN2 500 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 TGFBRAP1Q8WUH2 860 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 JADE3Q92613 823 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 BOCQ9BWV1 1114 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 NAA15Q9BXJ9 866 aaKnown RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 SMURF1Q9HCE7 757 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 FNIP2Q9P278 1114 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 GTF2IRD1Q9UHL9 959 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 TPX2Q9ULW0 747 aaKnown RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 LZTS1Q9Y250 596 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 PCDHA2Q9Y5H9 948 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 RGPD2P0DJD1 1756 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 MAP2P11137 1827 aaKnown RBP5.69□□□□□ -1.5
CDRT1-208ENST00000630868 KIF13BQ9NQT8 1826 aa5.69□□□□□ -1.5
CDRT1-208ENST00000630868 KIAA1551Q9HCM1 1747 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 NCAPD2Q15021 1401 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 GOLGA8AA7E2F4 631 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 GOLGA8BA8MQT2 603 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 FAM47E-STBD1D6RA91 191 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 H7C1D1 291 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 KCNK3O14649 394 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 NPHP1O15259 732 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 CYP27B1O15528 508 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 OIP5O43482 229 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 OFD1O75665 1012 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 ZBTB48P10074 688 aaPredicted RBP5.68□□□□□ -1.5
CDRT1-208ENST00000630868 ADCY1Q08828 1119 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 LMOD3Q0VAK6 560 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 ANKRD34AQ69YU3 496 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 SRLQ86TD4 932 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 LTV1Q96GA3 475 aaPredicted RBP5.68□□□□□ -1.5
CDRT1-208ENST00000630868 ELF4Q99607 663 aaPredicted RBP5.68□□□□□ -1.5
CDRT1-208ENST00000630868 ACO2Q99798 780 aaKnown RBP5.68□□□□□ -1.5
CDRT1-208ENST00000630868 SENP7Q9BQF6 1050 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 CDIP1Q9H305 208 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 SMOC1Q9H4F8 434 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 GPATCH2Q9NW75 528 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 BCCIPQ9P287 314 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDRT1-208ENST00000630868 DMTF1Q9Y222 760 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 SPO11Q9Y5K1 396 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 PXDNLA1KZ92 1463 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 PCDH11XQ9BZA7 1347 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 PCDH11YQ9BZA8 1340 aa5.68□□□□□ -1.5
CDRT1-208ENST00000630868 C10orf71Q711Q0 1435 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 ABHD14A-ACY1A0A1B0GW23 586 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 KDM1AO60341 852 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 CTNND1O60716 968 aaKnown RBP5.67□□□□□ -1.5
CDRT1-208ENST00000630868 LEFTY1O75610 366 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 NFICP08651 508 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 VSIG8P0DPA2 414 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 PDE6AP16499 860 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 C5AR1P21730 350 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 AMPD1P23109 780 aa5.67□□□□□ -1.5
CDRT1-208ENST00000630868 BMP8BP34820 402 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms