RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 XRCC5P13010 732 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 TNFAIP3P21580 790 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 PRDX5P30044 214 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 MESDQ14696 234 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TMEM154Q6P9G4 183 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 LRRC55Q6ZSA7 311 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 RFX8Q6ZV50 586 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 SPATA21Q7Z572 469 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 SRRM1Q8IYB3 904 aaKnown RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 SYCE1Q8N0S2 351 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 MAB21L3Q8N8X9 362 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 ERP44Q9BS26 406 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 TRIM4Q9C037 500 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 EBF2Q9HAK2 575 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 GPCPD1Q9NPB8 672 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 DCP1AQ9NPI6 582 aaPredicted RBP7.22□□□□□ -1.25
LMO3-235ENST00000616247 EMILIN3Q9NT22 766 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 ETAA1Q9NY74 926 aa7.22□□□□□ -1.25
LMO3-235ENST00000616247 NIP7Q9Y221 180 aaKnown RBP eCLIP7.22□□□□□ -1.25
LMO3-235ENST00000616247 MYH6P13533 1939 aa7.21□□□□□ -1.25
LMO3-235ENST00000616247 DPPA5A6NC42 116 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 STXBP3O00186 592 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 GSTA1P08263 222 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 BRAFP15056 766 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 UCHL3P15374 230 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 FGFR2P21802 821 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 TARSP26639 723 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 STAT1P42224 750 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 SSR1P43307 286 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 TRIM28Q13263 835 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 ITIH4Q14624 930 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 PLS1Q14651 629 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 UBE2SQ16763 222 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 KIAA1755Q5JYT7 1200 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 SUSD4Q5VX71 490 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 CRELD2Q6UXH1 353 aaPredicted RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 JAMLQ86YT9 394 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 ACTRT1Q8TDG2 376 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 ZNF317Q96PQ6 595 aaPredicted RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 TGS1Q96RS0 853 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 MAGEF1Q9HAY2 307 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 RIC8AQ9NPQ8 531 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 BLOC1S4Q9NUP1 217 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 CTNNAL1Q9UBT7 734 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 HAO1Q9UJM8 370 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 PPP1R9AQ9ULJ8 1098 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 PCDH11XQ9BZA7 1347 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 PCDH11YQ9BZA8 1340 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 RGPD2P0DJD1 1756 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 SRRM3A6NNA2 597 aaPredicted RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 ASAP2O43150 1006 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 CYTH3O43739 400 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
LMO3-235ENST00000616247 RARAP10276 462 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 ATP4AP20648 1035 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 PAPOLAP51003 745 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 ADCY2Q08462 1091 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 EMC10Q5UCC4 262 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 MAPKAPK5Q8IW41 473 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 CEP120Q8N960 986 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 SLC35G2Q8TBE7 412 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.21□□□□□ -1.26
LMO3-235ENST00000616247 ERP27Q96DN0 273 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 MMTAG2Q9BU76 263 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 PLA2G12BQ9BX93 195 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 PITPNM3Q9BZ71 974 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 ERVK-5Q9HDB9 667 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 METTL5Q9NRN9 209 aaKnown RBP7.21□□□□□ -1.26
LMO3-235ENST00000616247 BARHL2Q9NY43 387 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 ADAM22Q9P0K1 906 aa7.21□□□□□ -1.26
LMO3-235ENST00000616247 N4BP2Q86UW6 1770 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 PVALEFA0A1B0GWK0 134 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SPDYE5A6NIY4 337 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 ERVV-2B6SEH9 535 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 LAD1O00515 517 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SPOPO43791 374 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SLC37A4O43826 429 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 GH1P01241 217 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 MECOMQ03112 1051 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SLMAPQ14BN4 828 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 HP1BP3Q5SSJ5 553 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 ZNF746Q6NUN9 644 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 DTX3LQ8TDB6 740 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RAD54LQ92698 747 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RIOK1Q9BRS2 568 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 EDEM3Q9BZQ6 932 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 PIDD1Q9HB75 910 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 GCNT4Q9P109 453 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 ZMYND8Q9ULU4 1186 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 ARL2BPQ9Y2Y0 163 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 FLT1P17948 1338 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 ZNF142P52746 1687 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 LMTK3Q96Q04 1460 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SPAG7O75391 227 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 GJC1P36383 396 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RFC5P40937 340 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 PABPC4Q13310 644 aaKnown RBP eCLIP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms