RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 DRP2Q13474 957 aa25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 EPHA7Q15375 998 aa25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 SAFBQ15424 915 aaKnown RBP eCLIP25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 CRIPAKQ8N1N5 446 aa25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 FTHL17Q9BXU8 183 aa25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 ADAMTS10Q9H324 1103 aa25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 SUGCTQ9HAC7 445 aa25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 RC3H2Q9HBD1 1191 aaKnown RBP25.07■■□□□ 1.6
GTF2F1-204ENST00000594965 IGKV6-21A0A0C4DH24 114 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 DDX11L8A8MPP1 907 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 MARCH6O60337 910 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 RPS6KA5O75582 802 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 BAG4O95429 457 aaKnown RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 P4HBP07237 508 aaKnown RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 POU3F3P20264 500 aaPredicted RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 GRB10Q13322 594 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 CALCRLQ16602 461 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 NCAPH2Q6IBW4 605 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 MTMR9Q96QG7 549 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 TGS1Q96RS0 853 aaKnown RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 YME1L1Q96TA2 773 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 TSPYL2Q9H2G4 693 aaPredicted RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 FOXP1Q9H334 677 aaPredicted RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 RGL1Q9NZL6 768 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 MTUS1Q9ULD2 1270 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 AKT3Q9Y243 479 aa25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 FNDC1Q4ZHG4 1894 aaPredicted RBP25.06■■□□□ 1.6
GTF2F1-204ENST00000594965 PRRC2BQ5JSZ5 2229 aaKnown RBP25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 MGEA5O60502 916 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 TMOD1P28289 359 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 NLRP11P59045 1033 aaKnown RBP25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 NFX1Q12986 1120 aaKnown RBP25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 PLA2G4FQ68DD2 849 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 FAM228AQ86W67 206 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 FAM184AQ8NB25 1140 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 IL27Q8NEV9 243 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 TMX3Q96JJ7 454 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 MAP7D2Q96T17 732 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 C17orf80Q9BSJ5 609 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 TMEM60Q9H2L4 133 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 ST3GAL5Q9UNP4 418 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 MTCH2Q9Y6C9 303 aa25.05■■□□□ 1.6
GTF2F1-204ENST00000594965 NEMFO60524 1076 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 ATP2B1P20020 1258 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 CCDC85BQ15834 202 aaPredicted RBP25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 PPM1EQ8WY54 764 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 ZNF689Q96CS4 500 aaPredicted RBP25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 DYDC2Q96IM9 177 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 ZNF668Q96K58 619 aaPredicted RBP25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 LXNQ9BS40 222 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 PRDM6Q9NQX0 595 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 PCDHA12Q9UN75 941 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 TRANK1O15050 2925 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 ATG2AQ2TAZ0 1938 aa25.04■■□□□ 1.6
GTF2F1-204ENST00000594965 MAFO75444 373 aaPredicted RBP25.03■■□□□ 1.6
GTF2F1-204ENST00000594965 GPC3P51654 580 aa25.03■■□□□ 1.6
GTF2F1-204ENST00000594965 C4orf19Q8IY42 314 aa25.03■■□□□ 1.6
GTF2F1-204ENST00000594965 ZNF579Q8NAF0 562 aaKnown RBP25.03■■□□□ 1.6
GTF2F1-204ENST00000594965 GDPD5Q8WTR4 605 aa25.03■■□□□ 1.6
GTF2F1-204ENST00000594965 TTC12Q9H892 705 aaPredicted RBP25.03■■□□□ 1.6
GTF2F1-204ENST00000594965 DKC1O60832 514 aaKnown RBP eCLIP25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 DGKIO75912 1065 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 SLITRK3O94933 977 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 LINC00271P0C7V0 271 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 MCM7P33993 719 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 TXKP42681 527 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 NPEPPSP55786 919 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 CTTNQ14247 550 aaKnown RBP25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 CYP26B1Q9NR63 512 aa25.02■■□□□ 1.6
GTF2F1-204ENST00000594965 ZBTB39O15060 712 aa25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 GPR182O15218 404 aa25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 CYP4A11Q02928 519 aa25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 DSC3Q14574 896 aa25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 ZNF710Q8N1W2 664 aa25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 HSD17B14Q9BPX1 270 aa25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 EIF2AK1Q9BQI3 630 aaKnown RBP25.01■■□□□ 1.59
GTF2F1-204ENST00000594965 PRUNE2Q8WUY3 3088 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 EIF4BP23588 611 aaKnown RBP25■■□□□ 1.59
GTF2F1-204ENST00000594965 ZNF174Q15697 407 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 EPC2Q52LR7 807 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 ODR4Q5SWX8 454 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 FAM43BQ6ZT52 329 aaPredicted RBP25■■□□□ 1.59
GTF2F1-204ENST00000594965 NPAS4Q8IUM7 802 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 NOSTRINQ8IVI9 506 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 ADAM2Q99965 735 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 ZSWIM4Q9H7M6 989 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 RGS18Q9NS28 235 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 ADGRA3Q8IWK6 1321 aa25■■□□□ 1.59
GTF2F1-204ENST00000594965 GTPBP6O43824 516 aaPredicted RBP24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 REV3LO60673 3130 aa24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 U2AF2P26368 475 aaKnown RBP eCLIP24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 YWHABP31946 246 aaKnown RBP24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 MICALL1Q8N3F8 863 aa24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 FIBCD1Q8N539 461 aa24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 FBXO22Q8NEZ5 403 aa24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 CEP170P1Q96L14 293 aa24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 BACH2Q9BYV9 841 aa24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 DHX33Q9H6R0 707 aaKnown RBP24.99■■□□□ 1.59
GTF2F1-204ENST00000594965 POTEMA6NI47 508 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms