RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 FBXO2Q9UK22 296 aaPredicted RBP23.94■■□□□ 1.42
RETREG3-204ENST00000586796 TRPV2Q9Y5S1 764 aa23.94■■□□□ 1.42
RETREG3-204ENST00000586796 PARNO95453 639 aaKnown RBP23.93■■□□□ 1.42
RETREG3-204ENST00000586796 NASPP49321 788 aaPredicted RBP23.93■■□□□ 1.42
RETREG3-204ENST00000586796 RARRES1P49788 294 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 DNM2P50570 870 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 DNM1Q05193 864 aaKnown RBP23.93■■□□□ 1.42
RETREG3-204ENST00000586796 DRP2Q13474 957 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 SPECC1Q5M775 1068 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 PSRC1Q6PGN9 363 aaPredicted RBP23.93■■□□□ 1.42
RETREG3-204ENST00000586796 OTOP2Q7RTS6 562 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 CABP7Q86V35 215 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 TDHQ8IZJ6 230 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 CLIC6Q96NY7 704 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 CELF4Q9BZC1 486 aaKnown RBP23.93■■□□□ 1.42
RETREG3-204ENST00000586796 CSRNP2Q9H175 543 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 SCN5AQ14524 2016 aa23.93■■□□□ 1.42
RETREG3-204ENST00000586796 TANC1Q9C0D5 1861 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 GHRP10912 638 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 XRCC6P12956 609 aaKnown RBP eCLIP23.92■■□□□ 1.42
RETREG3-204ENST00000586796 LONP1P36776 959 aaKnown RBP23.92■■□□□ 1.42
RETREG3-204ENST00000586796 RFC5P40937 340 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 UBA7P41226 1012 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 KIZQ2M2Z5 673 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 LINC01465Q8N7H1 131 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 LINC00301Q8NCQ3 95 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 TMEM143Q96AN5 459 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 CDK5RAP3Q96JB5 506 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 RNPC3Q96LT9 517 aaKnown RBP23.92■■□□□ 1.42
RETREG3-204ENST00000586796 AK8Q96MA6 479 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 JPH2Q9BR39 696 aaPredicted RBP23.92■■□□□ 1.42
RETREG3-204ENST00000586796 PPME1Q9Y570 386 aa23.92■■□□□ 1.42
RETREG3-204ENST00000586796 SRPRBQ9Y5M8 271 aaKnown RBP23.92■■□□□ 1.42
RETREG3-204ENST00000586796 IGKV6-21A0A0C4DH24 114 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 E9PMD0 336 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 SPTLC2O15270 562 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 PFKMP08237 780 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 NCLP19338 710 aaKnown RBP23.91■■□□□ 1.42
RETREG3-204ENST00000586796 MUTP22033 750 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 MKRN4PQ13434 485 aaPredicted RBP23.91■■□□□ 1.42
RETREG3-204ENST00000586796 EMC2Q15006 297 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 RASSF8Q8NHQ8 419 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 CHAMP1Q96JM3 812 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 DHX33Q9H6R0 707 aaKnown RBP23.91■■□□□ 1.42
RETREG3-204ENST00000586796 CDHR5Q9HBB8 845 aa23.91■■□□□ 1.42
RETREG3-204ENST00000586796 SUCLA2Q9P2R7 463 aaPredicted RBP23.91■■□□□ 1.42
RETREG3-204ENST00000586796 DBR1Q9UK59 544 aaKnown RBP23.91■■□□□ 1.42
RETREG3-204ENST00000586796 CEP290O15078 2479 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 ARHGEF35A5YM69 484 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 ZBBXA8MT70 800 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 USO1O60763 962 aaKnown RBP23.9■■□□□ 1.42
RETREG3-204ENST00000586796 CXCL10P02778 98 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 NLRP11P59045 1033 aaKnown RBP23.9■■□□□ 1.42
RETREG3-204ENST00000586796 MAEAQ7L5Y9 396 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 EXOC8Q8IYI6 725 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 KRI1Q8N9T8 703 aaKnown RBP23.9■■□□□ 1.42
RETREG3-204ENST00000586796 SCLT1Q96NL6 688 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 PNMA5Q96PV4 448 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 OSMRQ99650 979 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 MTRQ99707 1265 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 CFAP45Q9UL16 551 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 DNM3Q9UQ16 869 aa23.9■■□□□ 1.42
RETREG3-204ENST00000586796 KDM3AQ9Y4C1 1321 aa23.89■■□□□ 1.42
RETREG3-204ENST00000586796 MYH15Q9Y2K3 1946 aa23.89■■□□□ 1.42
RETREG3-204ENST00000586796 YEATS4O95619 227 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 ACTN1P12814 892 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 NUCB2P80303 420 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 GRB10Q13322 594 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 LPIN1Q14693 890 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 TCTN1Q2MV58 587 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 FBXO47Q5MNV8 452 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 RHPN2Q8IUC4 686 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 DBF4BQ8NFT6 615 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 CALML4Q96GE6 196 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 EPSTI1Q96J88 318 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 BHMT2Q9H2M3 363 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 ATP6V0A4Q9HBG4 840 aa23.89■■□□□ 1.41
RETREG3-204ENST00000586796 EVPLQ92817 2033 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 GPR32O75388 356 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 DGAT1O75907 488 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 KARSQ15046 597 aaKnown RBP23.88■■□□□ 1.41
RETREG3-204ENST00000586796 ATL3Q6DD88 541 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 CNKSR3Q6P9H4 555 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 PADI6Q6TGC4 694 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 USP49Q70CQ1 688 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 KCNK18Q7Z418 384 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 KSR1Q8IVT5 923 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 NLRP7Q8WX94 980 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 SEPT8Q92599 483 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 NT5C3AQ9H0P0 336 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 XPNPEP1Q9NQW7 623 aa23.88■■□□□ 1.41
RETREG3-204ENST00000586796 SSBP05455 408 aaKnown RBP eCLIP23.87■■□□□ 1.41
RETREG3-204ENST00000586796 DDIT3P35638 169 aa23.87■■□□□ 1.41
RETREG3-204ENST00000586796 PLEKHG4Q58EX7 1191 aa23.87■■□□□ 1.41
RETREG3-204ENST00000586796 TCP11Q8WWU5 503 aa23.87■■□□□ 1.41
RETREG3-204ENST00000586796 PRPF31Q8WWY3 499 aaKnown RBP23.87■■□□□ 1.41
RETREG3-204ENST00000586796 HERVK_113Q902F9 699 aa23.87■■□□□ 1.41
RETREG3-204ENST00000586796 SYMPKQ92797 1274 aaKnown RBP23.87■■□□□ 1.41
RETREG3-204ENST00000586796 NLRP4Q96MN2 994 aa23.87■■□□□ 1.41
RETREG3-204ENST00000586796 IFIH1Q9BYX4 1025 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms