RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 LCHNA4D1U4 455 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 H3BQV1 296 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 EFCAB14O75071 495 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 CA3P07451 260 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 GRIN2CQ14957 1233 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 ZNF668Q96K58 619 aaPredicted RBP22.55■■□□□ 1.2
SS18-218ENST00000581021 OSMRQ99650 979 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 ADAMTS10Q9H324 1103 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 TMX1Q9H3N1 280 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 ZNF576Q9H609 170 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 SUGCTQ9HAC7 445 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 CYP26B1Q9NR63 512 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 MSRAQ9UJ68 235 aa22.55■■□□□ 1.2
SS18-218ENST00000581021 NOC2LQ9Y3T9 749 aaKnown RBP22.55■■□□□ 1.2
SS18-218ENST00000581021 EYSQ5T1H1 3165 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 A0A087WWV3 80 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 M0QZ92 97 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 GJB5O95377 273 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 SPATA31C1P0DKV0 1188 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 YWHABP31946 246 aaKnown RBP22.54■■□□□ 1.2
SS18-218ENST00000581021 TECP42680 631 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 FAM117BQ6P1L5 589 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 TPH2Q8IWU9 490 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 APBB2Q92870 758 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 SNX21Q969T3 373 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 ZSWIM4Q9H7M6 989 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.54■■□□□ 1.2
SS18-218ENST00000581021 FOXD4L1Q9NU39 408 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 PADI3Q9ULW8 664 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 SQORQ9Y6N5 450 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 ARID2Q68CP9 1835 aa22.54■■□□□ 1.2
SS18-218ENST00000581021 MAFO75444 373 aaPredicted RBP22.53■■□□□ 1.2
SS18-218ENST00000581021 PTGDRQ13258 359 aa22.53■■□□□ 1.2
SS18-218ENST00000581021 IL17AQ16552 155 aa22.53■■□□□ 1.2
SS18-218ENST00000581021 RTN4RL1Q86UN2 441 aaPredicted RBP22.53■■□□□ 1.2
SS18-218ENST00000581021 MYOCDQ8IZQ8 938 aa22.53■■□□□ 1.2
SS18-218ENST00000581021 CDX2Q99626 313 aaPredicted RBP22.53■■□□□ 1.2
SS18-218ENST00000581021 ERVK-5Q9HDB9 667 aa22.53■■□□□ 1.2
SS18-218ENST00000581021 AKT3Q9Y243 479 aa22.53■■□□□ 1.2
SS18-218ENST00000581021 MED24O75448 989 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 LYPLA2O95372 231 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 GPC3P51654 580 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 CRYBB1P53674 252 aaPredicted RBP22.52■■□□□ 1.2
SS18-218ENST00000581021 NLRP11P59045 1033 aaKnown RBP22.52■■□□□ 1.2
SS18-218ENST00000581021 FAM228AQ86W67 206 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 CEP170P1Q96L14 293 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 MAP7D2Q96T17 732 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 BMP2KQ9NSY1 1161 aaPredicted RBP22.52■■□□□ 1.2
SS18-218ENST00000581021 COL4A6Q14031 1691 aa22.52■■□□□ 1.2
SS18-218ENST00000581021 TLL1O43897 1013 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 MGEA5O60502 916 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 AMHP03971 560 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 PAK2Q13177 524 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 CATSPER3Q86XQ3 398 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 USP38Q8NB14 1042 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 NEK9Q8TD19 979 aa22.51■■□□□ 1.19
SS18-218ENST00000581021 INTS4Q96HW7 963 aaKnown RBP22.51■■□□□ 1.19
SS18-218ENST00000581021 DHX33Q9H6R0 707 aaKnown RBP22.51■■□□□ 1.19
SS18-218ENST00000581021 ENPP3O14638 875 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 DKC1O60832 514 aaKnown RBP eCLIP22.5■■□□□ 1.19
SS18-218ENST00000581021 TMOD1P28289 359 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 FXR2P51116 673 aaKnown RBP eCLIP22.5■■□□□ 1.19
SS18-218ENST00000581021 TAP1Q03518 808 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 RILPL1Q5EBL4 403 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 PPP2R2DQ66LE6 453 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 FERMT3Q86UX7 667 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 KSR1Q8IVT5 923 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 MYLIPQ8WY64 445 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 TOP1MTQ969P6 601 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 SLC28A3Q9HAS3 691 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 XPNPEP1Q9NQW7 623 aa22.5■■□□□ 1.19
SS18-218ENST00000581021 VPS37CA5D8V6 355 aaPredicted RBP22.49■■□□□ 1.19
SS18-218ENST00000581021 EPOPA6NHQ4 379 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 RPS6KA5O75582 802 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 SYT1P21579 422 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 HTRA4P83105 476 aaPredicted RBP22.49■■□□□ 1.19
SS18-218ENST00000581021 ECM1Q16610 540 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 XKR9Q5GH70 373 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 POTEGQ6S5H5 508 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 CRIPAKQ8N1N5 446 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 PIGOQ8TEQ8 1089 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 PRDM12Q9H4Q4 367 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 SUCLA2Q9P2R7 463 aaPredicted RBP22.49■■□□□ 1.19
SS18-218ENST00000581021 ST3GAL5Q9UNP4 418 aa22.49■■□□□ 1.19
SS18-218ENST00000581021 PP2D1A8MPX8 630 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 CSDE1O75534 798 aaKnown RBP22.48■■□□□ 1.19
SS18-218ENST00000581021 UPP2O95045 317 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 ATP2C1P98194 919 aaPredicted RBP22.48■■□□□ 1.19
SS18-218ENST00000581021 NFX1Q12986 1120 aaKnown RBP22.48■■□□□ 1.19
SS18-218ENST00000581021 EMC2Q15006 297 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 IGSF22Q8N9C0 903 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 TMEM143Q96AN5 459 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 RAD9AQ99638 391 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 ZBED2Q9BTP6 218 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 POLR3CQ9BUI4 534 aaPredicted RBP22.48■■□□□ 1.19
SS18-218ENST00000581021 TSPYL2Q9H2G4 693 aaPredicted RBP22.48■■□□□ 1.19
SS18-218ENST00000581021 CERS4Q9HA82 394 aa22.48■■□□□ 1.19
SS18-218ENST00000581021 TRANK1O15050 2925 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 TTC3P53804 2025 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 DARSP14868 501 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms