RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 HOXC13P31276 330 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 FAM189BP81408 668 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 FOXC1Q12948 553 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 CDC37Q16543 378 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 SLC44A4Q53GD3 710 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 IER5Q5VY09 327 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 LAIR1Q6GTX8 287 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 KCNV1Q6PIU1 500 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 TMEM173Q86WV6 379 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 ERC1Q8IUD2 1116 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 VPS52Q8N1B4 723 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 TRAPPC12Q8WVT3 735 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 TMEM40Q8WWA1 233 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 DDX1Q92499 740 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 GLG1Q92896 1179 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 MYL10Q9BUA6 226 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 EPS15L1Q9UBC2 864 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 GINS2Q9Y248 185 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 SDK1Q7Z5N4 2213 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 ABCB11O95342 1321 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 DENND4AQ7Z401 1863 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 TOP1P11387 765 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 TDGF1P13385 188 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 LAMP2P13473 410 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 MRPS9P82933 396 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 MTAPQ13126 283 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 NONOQ15233 471 aaKnown RBP eCLIP9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 QRICH1Q2TAL8 776 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 PSAPL1Q6NUJ1 521 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 STOX1Q6ZVD7 989 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 SLC24A5Q71RS6 500 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 MCF2L2Q86YR7 1114 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 ADGRF4Q8IZF3 695 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 APPBP2Q92624 585 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 GATA6Q92908 595 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 DDX23Q9BUQ8 820 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 ATP6V0A4Q9HBG4 840 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 SLC2A4RGQ9NR83 387 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 PNMA2Q9UL42 364 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 RAB23Q9ULC3 237 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 ST3GAL5Q9UNP4 418 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 SQORQ9Y6N5 450 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 NUMBLQ9Y6R0 609 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 CCDC171Q6TFL3 1326 aa9.24□□□□□ -0.93
PPP4R1-211ENST00000578875 LOXHD1Q8IVV2 1947 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 C2orf16Q68DN1 1984 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 KAT6AQ92794 2004 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 CCDC195A0A1B0GUA6 201 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 GSTTP1A0A1W2PQM5 241 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 DENND3A2RUS2 1198 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 SHISA7A6NL88 538 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 ANHXE9PGG2 379 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 FOXP2O15409 715 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 SNHG28P0DPA3 235 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 INSRRP14616 1297 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 RBM25P49756 843 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 HSD17B4P51659 736 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 HTR4Q13639 388 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 PARM1Q6UWI2 310 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 METTL7BQ6UX53 244 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 CELF5Q8N6W0 485 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 BCL7CQ8WUZ0 217 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 ZCCHC14Q8WYQ9 949 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 KLHL5Q96PQ7 755 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 PPP1R16BQ96T49 567 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 TMEM117Q9H0C3 514 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 ZBP1Q9H171 429 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 SFXN1Q9H9B4 322 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 WDR6Q9NNW5 1121 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 LTB4R2Q9NPC1 389 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 ZNF215Q9UL58 517 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 DOCK5Q9H7D0 1870 aa9.23□□□□□ -0.93
PPP4R1-211ENST00000578875 IPO8O15397 1037 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 ATP9AO75110 1047 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 RFPL2O75678 378 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SSBP05455 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SPATA31D3P0C874 917 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 TARSP26639 723 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 KLRC2P26717 231 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 TCF7P36402 384 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 CLCN4P51793 760 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 BCAR1P56945 870 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 KRT76Q01546 638 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SIM2Q14190 667 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 RRP12Q5JTH9 1297 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 STPG1Q5TH74 334 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SPATA31D4Q6ZUB0 917 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 PDZD3Q86UT5 571 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 FGF14Q92915 247 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 CLDN23Q96B33 292 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms