RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 FAN1Q9Y2M0 1017 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 A0A0U1RQG5 324 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-214ENST00000567572 EYA4O95677 639 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 AFPP02771 609 aaKnown RBP19.41■□□□□ 0.7
CMTM3-214ENST00000567572 KCNH2Q12809 1159 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 KLHDC7AQ5VTJ3 777 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 GOLGA6L1Q8N7Z2 621 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 REPS2Q8NFH8 660 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 SYTL5Q8TDW5 730 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-214ENST00000567572 WNK4Q96J92 1243 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 EIF2AK1Q9BQI3 630 aaKnown RBP19.41■□□□□ 0.7
CMTM3-214ENST00000567572 REEP2Q9BRK0 252 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 MXRA8Q9BRK3 442 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 SELENOOQ9BVL4 669 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 TBC1D7Q9P0N9 293 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 GTPBP10A4D1E9 387 aaKnown RBP19.4■□□□□ 0.7
CMTM3-214ENST00000567572 EIF3DO15371 548 aaKnown RBP eCLIP19.4■□□□□ 0.7
CMTM3-214ENST00000567572 USP2O75604 605 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-214ENST00000567572 BCRP11274 1271 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 LMAN1P49257 510 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 PSMC6P62333 389 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 KLHL30Q0D2K2 578 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 EMBQ6PCB8 327 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 HSD17B14Q9BPX1 270 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 TUFT1Q9NNX1 390 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 HOMER2Q9NSB8 354 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 AFG3L2Q9Y4W6 797 aa19.4■□□□□ 0.7
CMTM3-214ENST00000567572 CTDP1Q9Y5B0 961 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-214ENST00000567572 COL11A1P12107 1806 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-214ENST00000567572 UBE4BO95155 1302 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 ZC3H4Q9UPT8 1303 aaKnown RBP19.39■□□□□ 0.7
CMTM3-214ENST00000567572 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 TBCAO75347 108 aaKnown RBP19.39■□□□□ 0.7
CMTM3-214ENST00000567572 ARP10275 920 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 ITGB5P18084 799 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 ACTN2P35609 894 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 EPHB4P54760 987 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 NNTQ13423 1086 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 RAPGEF1Q13905 1077 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 IFI16Q16666 785 aaKnown RBP19.39■□□□□ 0.7
CMTM3-214ENST00000567572 NFRKBQ6P4R8 1299 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 B3GNT9Q6UX72 402 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 LEKR1Q6ZMV7 388 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 NIPA1Q7RTP0 329 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 IL31RAQ8NI17 732 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 ZNF577Q9BSK1 485 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.7
CMTM3-214ENST00000567572 STIM2Q9P246 746 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 DAAM1Q9Y4D1 1078 aa19.39■□□□□ 0.7
CMTM3-214ENST00000567572 OTOFQ9HC10 1997 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 GAS7O60861 476 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 IVLP07476 585 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 XRCC5P13010 732 aaKnown RBP19.39■□□□□ 0.69
CMTM3-214ENST00000567572 DSG3P32926 999 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 PRKCIP41743 596 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 PCNX4Q63HM2 1172 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 SFR1Q86XK3 245 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 WDR11Q9BZH6 1224 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 SALL4Q9UJQ4 1053 aa19.39■□□□□ 0.69
CMTM3-214ENST00000567572 N4BP1O75113 896 aaKnown RBP19.38■□□□□ 0.69
CMTM3-214ENST00000567572 RNF40O75150 1001 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 OAZ1P54368 228 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 HNRNPH2P55795 449 aaKnown RBP19.38■□□□□ 0.69
CMTM3-214ENST00000567572 RPS6P62753 249 aaKnown RBP19.38■□□□□ 0.69
CMTM3-214ENST00000567572 CYP4A11Q02928 519 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 PABPC4Q13310 644 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■□□□□ 9.5
CMTM3-214ENST00000567572 ZSCAN26Q16670 478 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 SLC30A10Q6XR72 485 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 ZFP91Q96JP5 570 aaPredicted RBP19.38■□□□□ 0.69
CMTM3-214ENST00000567572 TRERF1Q96PN7 1200 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 RIT2Q99578 217 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 SEL1LQ9UBV2 794 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 SNCAIPQ9Y6H5 919 aa19.38■□□□□ 0.69
CMTM3-214ENST00000567572 IPO5O00410 1097 aaKnown RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 PRPF6O94906 941 aaKnown RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 EPB41P11171 864 aaKnown RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 SH3D19Q5HYK7 790 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 C9orf131Q5VYM1 1079 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 FMNL3Q8IVF7 1028 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 CAVIN3Q969G5 261 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 DCPSQ96C86 337 aaKnown RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 DRC1Q96MC2 740 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 ZHX3Q9H4I2 956 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 RGL1Q9NZL6 768 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 KCND2Q9NZV8 630 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 UBIAD1Q9Y5Z9 338 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 GFPT2O94808 682 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 SYF2O95926 243 aaKnown RBP19.37■□□□□ 0.69
CMTM3-214ENST00000567572 CASP5P51878 434 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 VGLL4Q14135 290 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 EXOC3L4Q17RC7 722 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 DPY19L2P1Q6NXN4 242 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 C8orf74Q6P047 294 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 DLK2Q6UY11 383 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 CATSPERGQ6ZRH7 1159 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 MKNK1Q9BUB5 465 aa19.37■□□□□ 0.69
CMTM3-214ENST00000567572 UNC45AQ9H3U1 944 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms