RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	OTUD6A	Q7L8S5	288 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	MYOCD	Q8IZQ8	938 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	SNX21	Q969T3	373 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	CEP170P1	Q96L14	293 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	CEP89	Q96ST8	783 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	HSD17B14	Q9BPX1	270 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	SLC28A3	Q9HAS3	691 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	CYP26B1	Q9NR63	512 aa		27.58	■■■□□ 2.01
PPP4C-209	ENST00000566749	NPEPPS	P55786	919 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	PTGDR	Q13258	359 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	MKRN4P	Q13434	485 aa	Predicted RBP	27.57	■■■□□ 2
PPP4C-209	ENST00000566749	TMEM266	Q2M3C6	531 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	ZNF576	Q9H609	170 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	CDHR5	Q9HBB8	845 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	FOXD4L1	Q9NU39	408 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	TLL1	O43897	1013 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	PAK2	Q13177	524 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	FAM117B	Q6P1L5	589 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	C4orf32	Q8N8J7	132 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	OSMR	Q99650	979 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	JPH2	Q9BR39	696 aa	Predicted RBP	27.57	■■■□□ 2
PPP4C-209	ENST00000566749	PADI3	Q9ULW8	664 aa		27.57	■■■□□ 2
PPP4C-209	ENST00000566749	VPS37C	A5D8V6	355 aa	Predicted RBP	27.56	■■■□□ 2
PPP4C-209	ENST00000566749	MAF	O75444	373 aa	Predicted RBP	27.56	■■■□□ 2
PPP4C-209	ENST00000566749	DNM2	P50570	870 aa		27.56	■■■□□ 2
PPP4C-209	ENST00000566749	CRYBB1	P53674	252 aa	Predicted RBP	27.56	■■■□□ 2
PPP4C-209	ENST00000566749	NLRP11	P59045	1033 aa	Known RBP	27.56	■■■□□ 2
PPP4C-209	ENST00000566749	HSCB	Q8IWL3	235 aa		27.56	■■■□□ 2
PPP4C-209	ENST00000566749	IGKV6-21	A0A0C4DH24	114 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	27.55	■■■□□ 2
PPP4C-209	ENST00000566749	GPR32	O75388	356 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	RPS6KA5	O75582	802 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	GJB5	O95377	273 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	XKR9	Q5GH70	373 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	ZNF710	Q8N1W2	664 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	ZNF579	Q8NAF0	562 aa	Known RBP	27.55	■■■□□ 2
PPP4C-209	ENST00000566749	TMEM40	Q8WWA1	233 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	SLC7A3	Q8WY07	619 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.55	■■■□□ 2
PPP4C-209	ENST00000566749	PPME1	Q9Y570	386 aa		27.55	■■■□□ 2
PPP4C-209	ENST00000566749	ZBTB39	O15060	712 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	CA3	P07451	260 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	POLG	P54098	1239 aa	Predicted RBP	27.54	■■■□□ 2
PPP4C-209	ENST00000566749	NFX1	Q12986	1120 aa	Known RBP	27.54	■■■□□ 2
PPP4C-209	ENST00000566749	DRP2	Q13474	957 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	PPP2R2D	Q66LE6	453 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	EXOC8	Q8IYI6	725 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	ERMN	Q8TAM6	284 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	SCLT1	Q96NL6	688 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	FTHL17	Q9BXU8	183 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	NOC2L	Q9Y3T9	749 aa	Known RBP	27.54	■■■□□ 2
PPP4C-209	ENST00000566749	CDH23	Q9H251	3354 aa		27.54	■■■□□ 2
PPP4C-209	ENST00000566749	LAD1	O00515	517 aa		27.53	■■■□□ 2
PPP4C-209	ENST00000566749	LYPLA2	O95372	231 aa		27.53	■■■□□ 2
PPP4C-209	ENST00000566749	RFC5	P40937	340 aa		27.53	■■■□□ 2
PPP4C-209	ENST00000566749	FXR2	P51116	673 aa	Known RBP eCLIP	27.53	■■■□□ 2
PPP4C-209	ENST00000566749	ODR4	Q5SWX8	454 aa		27.53	■■■□□ 2
PPP4C-209	ENST00000566749	ZNF668	Q96K58	619 aa	Predicted RBP	27.53	■■■□□ 2
PPP4C-209	ENST00000566749	GUCD1	Q96NT3	240 aa		27.53	■■■□□ 2
PPP4C-209	ENST00000566749	TUFT1	Q9NNX1	390 aa		27.53	■■■□□ 2
PPP4C-209	ENST00000566749	UPP2	O95045	317 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	GPC3	P51654	580 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	NLRP7	Q8WX94	980 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	TOP1MT	Q969P6	601 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	CCDC43	Q96MW1	224 aa	Known RBP	27.52	■■■□□ 2
PPP4C-209	ENST00000566749	RAD9A	Q99638	391 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	ADAMTS10	Q9H324	1103 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	SUCLA2	Q9P2R7	463 aa	Predicted RBP	27.52	■■■□□ 2
PPP4C-209	ENST00000566749	MYO9B	Q13459	2157 aa		27.52	■■■□□ 2
PPP4C-209	ENST00000566749	ENPP3	O14638	875 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	GPR182	O15218	404 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	SPATA31C1	P0DKV0	1188 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	GRIN2C	Q14957	1233 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	BRAP	Q7Z569	592 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	FERMT3	Q86UX7	667 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	CATSPER3	Q86XQ3	398 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	POLR3C	Q9BUI4	534 aa	Predicted RBP	27.51	■■■□□ 2
PPP4C-209	ENST00000566749	RAB34	Q9BZG1	259 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	DHX33	Q9H6R0	707 aa	Known RBP	27.51	■■■□□ 2
PPP4C-209	ENST00000566749	ERVK-5	Q9HDB9	667 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	BMP2K	Q9NSY1	1161 aa	Predicted RBP	27.51	■■■□□ 2
PPP4C-209	ENST00000566749	ANKEF1	Q9NU02	776 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	LRWD1	Q9UFC0	647 aa		27.51	■■■□□ 2
PPP4C-209	ENST00000566749	ARID2	Q68CP9	1835 aa		27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	MED24	O75448	989 aa		27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	SYT1	P21579	422 aa		27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	CDC42EP1	Q00587	391 aa		27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	PIGO	Q8TEQ8	1089 aa		27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	CDX2	Q99626	313 aa	Predicted RBP	27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	ST3GAL5	Q9UNP4	418 aa		27.51	■■□□□ 1.99
PPP4C-209	ENST00000566749	EIF4B	P23588	611 aa	Known RBP	27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	PRPH	P41219	470 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	PDIA5	Q14554	519 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	HAUS3	Q68CZ6	603 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	DTHD1	Q6ZMT9	781 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	FAM228A	Q86W67	206 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	RHPN2	Q8IUC4	686 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	INSL6	Q9Y581	213 aa		27.5	■■□□□ 1.99
PPP4C-209	ENST00000566749	CHD9	Q3L8U1	2897 aa		27.49	■■□□□ 1.99
PPP4C-209	ENST00000566749		A0A087WWV3	80 aa		27.49	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms