RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TRAPPC10P48553 1259 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 Q4G0T1 1027 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 TCEAL5Q5H9L2 206 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 IER5Q5VY09 327 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
USB1-208ENST00000563207 MBOAT7Q96N66 472 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 ADGRA3Q8IWK6 1321 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 IGSF9BQ9UPX0 1349 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 C5orf42Q9H799 3197 aa17.64■□□□□ 0.41
USB1-208ENST00000563207 HBP1O60381 514 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 SYT1P21579 422 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 BMPR1AP36894 532 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 KRT76Q01546 638 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 ORC2Q13416 577 aaPredicted RBP17.63■□□□□ 0.41
USB1-208ENST00000563207 LETM2Q2VYF4 491 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 PAN2Q504Q3 1202 aaKnown RBP17.63■□□□□ 0.41
USB1-208ENST00000563207 MIS18BP1Q6P0N0 1132 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 BANK1Q8NDB2 785 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 EPHX3Q9H6B9 360 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
USB1-208ENST00000563207 MYO7AQ13402 2215 aa17.63■□□□□ 0.41
USB1-208ENST00000563207 H3BQ06 376 aaPredicted RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 MSH4O15457 936 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 C22orf31O95567 290 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 GTF2F1P35269 517 aaKnown RBP eCLIP17.62■□□□□ 0.41
USB1-208ENST00000563207 NFX1Q12986 1120 aaKnown RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 PAK2Q13177 524 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 BTG3Q14201 252 aaPredicted RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 UGCGQ16739 394 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 EARS2Q5JPH6 523 aaKnown RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 MCTP1Q6DN14 999 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 ZNF668Q96K58 619 aaPredicted RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 SAMD11Q96NU1 681 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 ERVK-5Q9HDB9 667 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 ALG13Q9NP73 1137 aaKnown RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 GABBR1Q9UBS5 961 aa17.62■□□□□ 0.41
USB1-208ENST00000563207 NOL7Q9UMY1 257 aaKnown RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 MAFBQ9Y5Q3 323 aaPredicted RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 MRPL42Q9Y6G3 142 aaKnown RBP17.62■□□□□ 0.41
USB1-208ENST00000563207 M0QZ92 97 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 STX6O43752 255 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 ZNF862O60290 1169 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 CCNT1O60563 726 aaKnown RBP17.61■□□□□ 0.41
USB1-208ENST00000563207 VTNP04004 478 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 IL9P15248 144 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 SLC26A2P50443 739 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 CAMK1Q14012 370 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 KIZQ2M2Z5 673 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 BRAPQ7Z569 592 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 HCSTQ9UBK5 93 aa17.61■□□□□ 0.41
USB1-208ENST00000563207 DDX25Q9UHL0 483 aaKnown RBP17.61■□□□□ 0.41
USB1-208ENST00000563207 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
USB1-208ENST00000563207 C5orf67F2Z3F1 127 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 TBX3O15119 743 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 CHMP2AO43633 222 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 DNAJB1P25685 340 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 ANP32AP39687 249 aaKnown RBP17.6■□□□□ 0.41
USB1-208ENST00000563207 RILPL1Q5EBL4 403 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 ZNF484Q5JVG2 852 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 ZNF746Q6NUN9 644 aaPredicted RBP17.6■□□□□ 0.41
USB1-208ENST00000563207 EP400NLQ6ZTU2 488 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 METTL13Q8N6R0 699 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 CLP1Q92989 425 aaKnown RBP17.6■□□□□ 0.41
USB1-208ENST00000563207 FAM20AQ96MK3 541 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 RIT2Q99578 217 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 OSMRQ99650 979 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 ST3GAL5Q9UNP4 418 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 PCDHA10Q9Y5I2 948 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 SQORQ9Y6N5 450 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 FNDC1Q4ZHG4 1894 aaPredicted RBP17.6■□□□□ 0.41
USB1-208ENST00000563207 PLXNA4Q9HCM2 1894 aa17.6■□□□□ 0.41
USB1-208ENST00000563207 COL1A2P08123 1366 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 TMEM150BA6NC51 233 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 FAM205CA6NFA0 338 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 GPR32O75388 356 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 TDP2O95551 362 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 COL9A1P20849 921 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 LTBRP36941 435 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 CLCN3P51790 818 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 DLX2Q07687 328 aaPredicted RBP17.59■□□□□ 0.41
USB1-208ENST00000563207 PTPROQ16827 1216 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 LEXMQ3ZCV2 418 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 NME8Q8N427 588 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 LRRC71Q8N4P6 559 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 BBXQ8WY36 941 aaPredicted RBP17.59■□□□□ 0.41
USB1-208ENST00000563207 UNC45AQ9H3U1 944 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
USB1-208ENST00000563207 TCEAL9Q9UHQ7 104 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 SAMM50Q9Y512 469 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
USB1-208ENST00000563207 NCOR1O75376 2440 aa17.58■□□□□ 0.41
USB1-208ENST00000563207 LINC01565O15544 149 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 RPS6KA5O75582 802 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 BAG4O95429 457 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms