RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 MAPK9P45984 424 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 GTF2A2P52657 109 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CTAG1AP78358 180 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 MECOMQ03112 1051 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 COL9A2Q14055 689 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CBX2Q14781 532 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 GEN1Q17RS7 908 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CYP27C1Q4G0S4 372 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 SETMARQ53H47 684 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CAVIN4Q5BKX8 364 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF648Q5T619 568 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCDC30Q5VVM6 783 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 PCNX4Q63HM2 1172 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 GALNT17Q6IS24 598 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 TATDN1Q6P1N9 297 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ARHGEF18Q6ZSZ5 1173 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 LHFPL2Q6ZUX7 228 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 OTOP3Q7RTS5 596 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ARMC9Q7Z3E5 817 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 MILR1Q7Z6M3 343 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 COLGALT2Q8IYK4 626 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 FAM186BQ8IYM0 893 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 SHISA5Q8N114 240 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 THEMISQ8N1K5 641 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ERMNQ8TAM6 284 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 RIN3Q8TB24 985 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCHCR1Q8TD31 782 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF296Q8WUU4 475 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 SNX21Q969T3 373 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 MTMR8Q96EF0 704 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CHFRQ96EP1 664 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 MISP3Q96FF7 219 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 COG8Q96MW5 612 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ALPK1Q96QP1 1244 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 SH3GL3Q99963 347 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CRACR2AQ9BSW2 395 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 RSRP1Q9BUV0 290 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 TRIM5Q9C035 493 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 SLC7A5P2Q9GIP4 190 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCDC68Q9H2F9 335 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CLSTN2Q9H4D0 955 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 FBRSQ9HAH7 460 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ANKEF1Q9NU02 776 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 KLHL11Q9NVR0 708 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 GJD2Q9UKL4 321 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCDC69A6NI79 296 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 A8MVJ9 347 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 RTCAO00442 366 aaKnown RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 ERC2O15083 957 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 HOXC11O43248 304 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TLR5O60602 858 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 USP2O75604 605 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 INMTO95050 263 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 PDGFAP04085 211 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 ITGB1P05556 798 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 THEGLP0DJG4 465 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 CSTF2P33240 577 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 EIF4A3P38919 411 aaKnown RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 MATR3P43243 847 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 KCNJ6P48051 423 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TUBA1BP68363 451 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TUBA3CQ13748 450 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 CLPPQ16740 277 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 KRT71Q3SY84 523 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 KIAA0319Q5VV43 1072 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCDC81Q6ZN84 652 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TUBA1AQ71U36 451 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF765Q7L2R6 523 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 NLRP10Q86W26 655 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TEX11Q8IYF3 940 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 DCLK2Q8N568 766 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 FAM26EQ8N5C1 309 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 SPERTQ8NA61 448 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TRIM58Q8NG06 486 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 OTUD7AQ8TE49 926 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 SNX29Q8TEQ0 813 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 RUFY2Q8WXA3 655 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 FERMT2Q96AC1 680 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 DDX11Q96FC9 970 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 C1orf74Q96LT6 269 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 C7orf25Q9BPX7 421 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 EIF2AK1Q9BQI3 630 aaKnown RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 PI4K2AQ9BTU6 479 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 MRPL46Q9H2W6 279 aaKnown RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 GGNBP2Q9H3C7 697 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 MROH8Q9H579 483 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 ALG13Q9NP73 1137 aaKnown RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 PRDM5Q9NQX1 630 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TOPORSQ9NS56 1045 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 MRGBPQ9NV56 204 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 SLC5A4Q9NY91 659 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 PHTF1Q9UMS5 762 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 DMTF1Q9Y222 760 aa5□□□□□ -1.61
HMGB3P26-201ENST00000560051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5□□□□□ -1.61
HMGB3P26-201ENST00000560051 GAKO14976 1311 aa4.99□□□□□ -1.61
HMGB3P26-201ENST00000560051 EVC2Q86UK5 1308 aa4.99□□□□□ -1.61
HMGB3P26-201ENST00000560051 SYNDIG1LA6NDD5 238 aa4.99□□□□□ -1.61
HMGB3P26-201ENST00000560051 A6NHS1 94 aa4.99□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCDC169A6NNP5 214 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms