RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LRRC71Q8N4P6 559 aa24.16■■□□□ 1.46
SNX1-206ENST00000559389 RETREG2Q8NC44 543 aa24.16■■□□□ 1.46
SNX1-206ENST00000559389 DNAJB3Q8WWF6 145 aa24.16■■□□□ 1.46
SNX1-206ENST00000559389 JPH2Q9BR39 696 aaPredicted RBP24.16■■□□□ 1.46
SNX1-206ENST00000559389 FAM49AQ9H0Q0 323 aaPredicted RBP24.16■■□□□ 1.46
SNX1-206ENST00000559389 WNT8AQ9H1J5 351 aa24.16■■□□□ 1.46
SNX1-206ENST00000559389 DNM3Q9UQ16 869 aa24.16■■□□□ 1.46
SNX1-206ENST00000559389 GAS2O43903 313 aaKnown RBP24.15■■□□□ 1.46
SNX1-206ENST00000559389 USO1O60763 962 aaKnown RBP24.15■■□□□ 1.46
SNX1-206ENST00000559389 DGAT1O75907 488 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 TIMP1P01033 207 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 RAG1P15918 1043 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 THPOP40225 353 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 RESP18Q5W5W9 173 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 EFCAB12Q6NXP0 572 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 TRAF7Q6Q0C0 670 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 KIAA0319LQ8IZA0 1049 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 METTL13Q8N6R0 699 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 XPNPEP1Q9NQW7 623 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 BMP2KQ9NSY1 1161 aaPredicted RBP24.15■■□□□ 1.46
SNX1-206ENST00000559389 CCDC39Q9UFE4 941 aa24.15■■□□□ 1.46
SNX1-206ENST00000559389 A0A087X0B3 334 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 CYP2C18P33260 490 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 DRP2Q13474 957 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 ADALQ6DHV7 355 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 LRRC8DQ7L1W4 858 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 RSPH3Q86UC2 560 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 EXOC8Q8IYI6 725 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 ATP6V0A4Q9HBG4 840 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 BLOC1S4Q9NUP1 217 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 PCDH10Q9P2E7 1040 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 STK17AQ9UEE5 414 aa24.14■■□□□ 1.45
SNX1-206ENST00000559389 SELPP16109 830 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 TMOD1P28289 359 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 MKRN4PQ13434 485 aaPredicted RBP24.13■■□□□ 1.45
SNX1-206ENST00000559389 ZNF618Q5T7W0 954 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 PADI6Q6TGC4 694 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 MAP7D2Q96T17 732 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 MTRQ99707 1265 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 SUGCTQ9HAC7 445 aa24.13■■□□□ 1.45
SNX1-206ENST00000559389 EVPLQ92817 2033 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 A0A1W2PQ27 194 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 A0A1W2PQ64 194 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 A0A1W2PQD8 194 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 CTSHP09668 335 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 SLC12A3P55017 1021 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 MRPS6P82932 125 aaKnown RBP24.12■■□□□ 1.45
SNX1-206ENST00000559389 MGAT3Q09327 533 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 NAALADL2Q58DX5 795 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 FAM26DQ5JW98 314 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 RRAGBQ5VZM2 374 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 CCDC73Q6ZRK6 1079 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 NME8Q8N427 588 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 SYT2Q8N9I0 419 aaPredicted RBP24.12■■□□□ 1.45
SNX1-206ENST00000559389 RAD54LQ92698 747 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 FAM13BQ9NYF5 915 aa24.12■■□□□ 1.45
SNX1-206ENST00000559389 IQCF3P0C7M6 154 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 PLA2G4BP0C869 781 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 CYP11B2P19099 503 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 CMA1P23946 247 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 CCL23P55773 120 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 MFSD5Q6N075 450 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 MCPH1Q8NEM0 835 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 LARP4BQ92615 738 aaKnown RBP24.11■■□□□ 1.45
SNX1-206ENST00000559389 RUSC1Q9BVN2 902 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 AKT3Q9Y243 479 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 TRPV2Q9Y5S1 764 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 CDY2AQ9Y6F7 541 aa24.11■■□□□ 1.45
SNX1-206ENST00000559389 H0YGN5 161 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 VTNP04004 478 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 STAT6P42226 847 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 E2F4Q16254 413 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 CSPP1Q1MSJ5 1256 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 CLEC17AQ6ZS10 378 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 PDILTQ8N807 584 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 TMEM87AQ8NBN3 555 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 TCP11Q8WWU5 503 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 BADQ92934 168 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 TMEM143Q96AN5 459 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 SCLYQ96I15 445 aa24.1■■□□□ 1.45
SNX1-206ENST00000559389 DNAH12Q6ZR08 3092 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 FAM237AA0A1B0GTK4 181 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 RSPH10B2B2RC85 870 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 CHRNA1P02708 482 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 SSBP05455 408 aaKnown RBP eCLIP24.09■■□□□ 1.45
SNX1-206ENST00000559389 RSPH10BP0C881 870 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 PFKFB1P16118 471 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 DNM2P50570 870 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 TMEM62Q0P6H9 643 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 MCM6Q14566 821 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 IER5Q5VY09 327 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 RINT1Q6NUQ1 792 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 PSPC1Q8WXF1 523 aaKnown RBP24.09■■□□□ 1.45
SNX1-206ENST00000559389 SUCLA2Q9P2R7 463 aaPredicted RBP24.09■■□□□ 1.45
SNX1-206ENST00000559389 HPSEQ9Y251 543 aa24.09■■□□□ 1.45
SNX1-206ENST00000559389 SCN5AQ14524 2016 aa24.08■■□□□ 1.45
SNX1-206ENST00000559389 M0QZ92 97 aa24.08■■□□□ 1.45
SNX1-206ENST00000559389 PARNO95453 639 aaKnown RBP24.08■■□□□ 1.45
SNX1-206ENST00000559389 RFC2P35250 354 aa24.08■■□□□ 1.45
SNX1-206ENST00000559389 MBTPS1Q14703 1052 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms