RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 VWA3BQ502W6 1294 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 NT5DC1Q5TFE4 455 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 CCAR1Q8IX12 1150 aaKnown RBP5.84□□□□□ -1.47
CASC4-206ENST00000558847 HOOK2Q96ED9 719 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 CDH19Q9H159 772 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 WNT8AQ9H1J5 351 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 GOLGA6AQ9NYA3 693 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 DTLQ9NZJ0 730 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 PRAMEF25A6NGN4 478 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 MAFGO15525 162 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 PRICKLE3O43900 615 aaPredicted RBP5.83□□□□□ -1.48
CASC4-206ENST00000558847 KDM1AO60341 852 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 RFPL1O75677 317 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 CT47B1P0C2W7 299 aaPredicted RBP5.83□□□□□ -1.48
CASC4-206ENST00000558847 CYP2C8P10632 490 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 RECQLP46063 649 aaPredicted RBP5.83□□□□□ -1.48
CASC4-206ENST00000558847 RAB27AP51159 221 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 CAP1Q01518 475 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 INAVAQ3KP66 663 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 CPZQ66K79 652 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 TIGD7Q6NT04 549 aaPredicted RBP5.83□□□□□ -1.48
CASC4-206ENST00000558847 C7orf31Q8N865 590 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 FNIP1Q8TF40 1166 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 FUBP3Q96I24 572 aaKnown RBP eCLIP5.83□□□□□ -1.48
CASC4-206ENST00000558847 MAML3Q96JK9 1138 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 NOX5Q96PH1 765 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 SYT3Q9BQG1 590 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 SPATA25Q9BR10 227 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 TCF7L1Q9HCS4 588 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 C14orf119Q9NWQ9 140 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 MKS1Q9NXB0 559 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 ZIM2Q9NZV7 527 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 ZNF180Q9UJW8 692 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 ASB1Q9Y576 335 aa5.83□□□□□ -1.48
CASC4-206ENST00000558847 TNKSO95271 1327 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 TRIM75PA6NK02 468 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 GOLGA8AA7E2F4 631 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 GOLGA8BA8MQT2 603 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 DVL2O14641 736 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 KCNK3O14649 394 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 PRC1O43663 620 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 SCGB1D2O95969 90 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 RBP3P10745 1247 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 ABCB5Q2M3G0 1257 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 ZXDCQ2QGD7 858 aaPredicted RBP5.82□□□□□ -1.48
CASC4-206ENST00000558847 TMEM240Q5SV17 173 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 NXNQ6DKJ4 435 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 CCSAPQ6IQ19 270 aaPredicted RBP5.82□□□□□ -1.48
CASC4-206ENST00000558847 CXorf57Q6NSI4 855 aaKnown RBP5.82□□□□□ -1.48
CASC4-206ENST00000558847 ESPNLQ6ZVH7 1005 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 PNMA8AQ86V59 439 aaPredicted RBP5.82□□□□□ -1.48
CASC4-206ENST00000558847 PHYKPLQ8IUZ5 450 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 RBM12BQ8IXT5 1001 aaKnown RBP5.82□□□□□ -1.48
CASC4-206ENST00000558847 CBARPQ8N350 705 aaPredicted RBP5.82□□□□□ -1.48
CASC4-206ENST00000558847 LINC00482Q8N8I6 264 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 DDX11Q96FC9 970 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 GPR20Q99678 358 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 GORASP1Q9BQQ3 440 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 ZMAT4Q9H898 229 aa5.82□□□□□ -1.48
CASC4-206ENST00000558847 K7ESM1 405 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 ABLIM3O94929 683 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 LRG1P02750 347 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 LTFP02788 710 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 C4BPAP04003 597 aaKnown RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 MTHFD2P13995 350 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 INSRRP14616 1297 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 FAHP16930 419 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 ITGA1P56199 1179 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 PGM2L1Q6PCE3 622 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 TEPPQ6URK8 271 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 LIPIQ6XZB0 460 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 TTLL7Q6ZT98 887 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 SAPCD2Q86UD0 394 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 ZC3H18Q86VM9 953 aaKnown RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 WDR75Q8IWA0 830 aaKnown RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 C1orf162Q8NEQ5 155 aaPredicted RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 CLEC4DQ8WXI8 215 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 FAXDC2Q96IV6 333 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 C16orf92Q96LL3 132 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 NUP88Q99567 741 aaPredicted RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 HSPBP1Q9NZL4 362 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 PNMA8BQ9ULN7 279 aaPredicted RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 WASF3Q9UPY6 502 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 ANKRD6Q9Y2G4 727 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 GIT1Q9Y2X7 761 aa5.81□□□□□ -1.48
CASC4-206ENST00000558847 LUC7L2Q9Y383 392 aaKnown RBP5.81□□□□□ -1.48
CASC4-206ENST00000558847 FAM90A27PA6NNH2 459 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 MT-CO1P00395 513 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 IARSP41252 1262 aaKnown RBP5.8□□□□□ -1.48
CASC4-206ENST00000558847 EFEMP1Q12805 493 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 PUM1Q14671 1186 aaKnown RBP eCLIP5.8□□□□□ -1.48
CASC4-206ENST00000558847 ZNF827Q17R98 1081 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 PAN2Q504Q3 1202 aaKnown RBP5.8□□□□□ -1.48
CASC4-206ENST00000558847 CATSPEREQ5SY80 951 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 FAM102BQ5T8I3 360 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 FSTL4Q6MZW2 842 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 CD300LDQ6UXZ3 194 aa5.8□□□□□ -1.48
CASC4-206ENST00000558847 PROSER1Q86XN7 944 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms