RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SLFN5Q08AF3 891 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 RAB3GAP1Q15042 981 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 ANKRD39Q53RE8 183 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 BEND3Q5T5X7 828 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 CIAPIN1Q6FI81 312 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 VHLLQ6RSH7 139 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 UBE3BQ7Z3V4 1068 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 CILP2Q8IUL8 1156 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 LINS1Q8NG48 757 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 TTLL11Q8NHH1 800 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 ZSCAN18Q8TBC5 510 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-203ENST00000554636 PPP1R14AQ96A00 147 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 GREM2Q9H772 168 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 CRTAC1Q9NQ79 661 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 WHRNQ9P202 907 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 TRPM7Q96QT4 1865 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 TEX51A0A1B0GUA7 166 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQ45 241 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQY0 241 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 SHTN1A0MZ66 631 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 PSMD14O00487 310 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 FGF10O15520 208 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 ECE2O60344 883 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 SEMA7AO75326 666 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 RAD17O75943 681 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 UFL1O94874 794 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 CSF1RP07333 972 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 MED14OSP0DP75 135 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 ZSCAN22P10073 491 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 VIPR1P32241 457 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 NOP2P46087 812 aaKnown RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 GMPSP49915 693 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 EPHB3P54753 998 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 POU4F1Q01851 419 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 EPHA10Q5JZY3 1008 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 SPOCD1Q6ZMY3 1216 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 TMC6Q7Z403 805 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 C1QL4Q86Z23 238 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 ANKRD18AQ8IVF6 992 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 TRMT2AQ8IZ69 625 aaKnown RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 C19orf47Q8N9M1 422 aaKnown RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 SEC16BQ96JE7 1060 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 CDC5LQ99459 802 aaKnown RBP5.24□□□□□ -1.57
VTI1B-203ENST00000554636 MCMBPQ9BTE3 642 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 KLHL25Q9H0H3 589 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 IRF2BPLQ9H1B7 796 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 DBNDD1Q9H9R9 158 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 GCM1Q9NP62 436 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 SIRT5Q9NXA8 310 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 GPRC5DQ9NZD1 345 aa5.24□□□□□ -1.57
VTI1B-203ENST00000554636 XDHP47989 1333 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 IRS2Q9Y4H2 1338 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQJ5 194 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 GRM8O00222 908 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 PEX10O60683 326 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 PPM1BO75688 479 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 ALDH1L1O75891 902 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 MPOP05164 745 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 SSBP05455 408 aaKnown RBP eCLIP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 TCF3P15923 654 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 ATF4P18848 351 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 FOXO4P98177 505 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 LAPTM5Q13571 262 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 HLA-DQA1Q5Y7H0 255 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 CYP2R1Q6VVX0 501 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 LCNL1Q6ZST4 164 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 USP50Q70EL3 339 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 PNMA8AQ86V59 439 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 CNTROBQ8N137 903 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 JMYQ8N9B5 988 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 SSH1Q8WYL5 1049 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 PTCHD1Q96NR3 888 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 EYA3Q99504 573 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 LGR4Q9BXB1 951 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 ADARB2Q9NS39 739 aaKnown RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 APEX2Q9UBZ4 518 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 CGGBP1Q9UFW8 167 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 MBD1Q9UIS9 605 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 CNOT6Q9ULM6 557 aaKnown RBP5.23□□□□□ -1.57
VTI1B-203ENST00000554636 CNTNAP1P78357 1384 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 MED23Q9ULK4 1368 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 PCNTO95613 3336 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 THSD7BQ9C0I4 1608 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 UTYO14607 1347 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 PTPRCP08575 1304 aa5.23□□□□□ -1.57
VTI1B-203ENST00000554636 POLR2AP24928 1970 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 TRAF5O00463 557 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 SMAD7O15105 426 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 VIL1P09327 827 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 KLRK1P26718 216 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 IGHMBP2P38935 993 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 CCT4P50991 539 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 ERVFRD-1P60508 538 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 SSPNQ14714 243 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 TNIP1Q15025 636 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 LARP1BQ659C4 914 aaKnown RBP5.22□□□□□ -1.57
VTI1B-203ENST00000554636 BICRALQ6AI39 1079 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 RPTNQ6XPR3 784 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 DPF2Q92785 391 aa5.22□□□□□ -1.57
VTI1B-203ENST00000554636 KAZALD1Q96I82 304 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms