RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 TRPM3Q9HCF6 1732 aaPredicted RBP7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 CRYBG1Q9Y4K1 1723 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 SPATA31E1Q6ZUB1 1445 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 SPATA31A3Q5VYP0 1347 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 WTIPA6NIX2 430 aaPredicted RBP7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 GNAT3A8MTJ3 354 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 SH3BP5O60239 455 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 PTX3P26022 381 aaPredicted RBP7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 GRAMD1BQ3KR37 738 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 CYP2R1Q6VVX0 501 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 RNF111Q6ZNA4 994 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 FRMD7Q6ZUT3 714 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 PTRH1Q86Y79 214 aaKnown RBP7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 UNC5CLQ8IV45 518 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 Q8N1Y9 231 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 TMEM52Q8NDY8 209 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 SH3RF2Q8TEC5 729 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 ZNF281Q9Y2X9 895 aa7.67□□□□□ -1.18
TGFBR1-208ENST00000550253 TNS1Q9HBL0 1735 aaKnown RBP7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 RPGRIP1LQ68CZ1 1315 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 SSU72P8A0A1W2PR75 194 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 TMEM82A0PJX8 343 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 A6NNZ2 444 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 FAM155AB1AL88 458 aaPredicted RBP7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 MAN2B1O00754 1011 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 PMM2O15305 246 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 KDM1AO60341 852 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 CTNND1O60716 968 aaKnown RBP7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 FKTNO75072 461 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 FGAP02671 866 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 GNAT1P11488 350 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 KIF11P52732 1056 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 ZNF267Q14586 743 aaPredicted RBP7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 IFI16Q16666 785 aaKnown RBP7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 NKPD1Q17RQ9 610 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 FAM83BQ5T0W9 1011 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 ESRP1Q6NXG1 681 aaKnown RBP7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 ERAP2Q6P179 960 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 TOGARAM2Q6ZUX3 1019 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 OTOP3Q7RTS5 596 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 ZAR1Q86SH2 424 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 SVOPQ8N4V2 548 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 TGFBRAP1Q8WUH2 860 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 DLG3Q92796 817 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 TMEM169Q96HH4 297 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 PCIF1Q9H4Z3 704 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 STK26Q9P289 416 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 PHTF1Q9UMS5 762 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 PCDHA11Q9Y5I1 949 aa7.66□□□□□ -1.18
TGFBR1-208ENST00000550253 PIK3C2GO75747 1445 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 NKRFO15226 690 aaKnown RBP eCLIP7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 NPHS1O60500 1241 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 OFD1O75665 1012 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 COL6A2P12110 1019 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ENDOUP21128 410 aaKnown RBP7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 SPIRE1Q08AE8 756 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ADGRE1Q14246 886 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 INO80DQ53TQ3 878 aaPredicted RBP7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ATAT1Q5SQI0 421 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 CEP68Q76N32 757 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 CLEC10AQ8IUN9 316 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 GJA10Q969M2 543 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 TBC1D32Q96NH3 1257 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ACAP3Q96P50 834 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 FAM83CQ9BQN1 747 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ACSS2Q9NR19 701 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ZNF277Q9NRM2 450 aaPredicted RBP7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 GNL3LQ9NVN8 582 aaKnown RBP7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 B3GALT1Q9Y5Z6 326 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 U3KQE9 123 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 ALS2Q96Q42 1657 aa7.65□□□□□ -1.18
TGFBR1-208ENST00000550253 TNS3Q68CZ2 1445 aa7.65□□□□□ -1.19
TGFBR1-208ENST00000550253 LRPPRCP42704 1394 aaKnown RBP7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 RHCEP18577 417 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 GJA9P57773 515 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 RHDQ02161 417 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 MBTPS1Q14703 1052 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 CYP27C1Q4G0S4 372 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 CDKAL1Q5VV42 579 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 ZPBP2Q6X784 338 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 SHISA5Q8N114 240 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 SSH1Q8WYL5 1049 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 NACC1Q96RE7 527 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 RNF38Q9H0F5 515 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 PPCSQ9HAB8 311 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 ATG3Q9NT62 314 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 KLHL11Q9NVR0 708 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 ERVK13-1Q9NX77 482 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 PUF60Q9UHX1 559 aaKnown RBP7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 UTRNP46939 3433 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 RGPD1P0DJD0 1748 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 CCDC144AA2RUR9 1427 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 YTHDC2Q9H6S0 1430 aaKnown RBP7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 ABCC11Q96J66 1382 aa7.64□□□□□ -1.19
TGFBR1-208ENST00000550253 RASSF10A6NK89 507 aa7.63□□□□□ -1.19
TGFBR1-208ENST00000550253 PPP1R11O60927 126 aaPredicted RBP7.63□□□□□ -1.19
TGFBR1-208ENST00000550253 CYP17A1P05093 508 aa7.63□□□□□ -1.19
TGFBR1-208ENST00000550253 POU2F2P09086 479 aa7.63□□□□□ -1.19
TGFBR1-208ENST00000550253 AGXTP21549 392 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms