RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF710Q8N1W2 664 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 METTL13Q8N6R0 699 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 CEP170P1Q96L14 293 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 RNPC3Q96LT9 517 aaKnown RBP21.37■■□□□ 1.01
DDX55-211ENST00000544429 USP28Q96RU2 1077 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 DBR1Q9UK59 544 aaKnown RBP21.37■■□□□ 1.01
DDX55-211ENST00000544429 TRPV2Q9Y5S1 764 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 PP2D1A8MPX8 630 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 BAIAP3O94812 1187 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 F13A1P00488 732 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 TMOD1P28289 359 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 RFC5P40937 340 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 NASPP49321 788 aaPredicted RBP21.36■■□□□ 1.01
DDX55-211ENST00000544429 TMEM62Q0P6H9 643 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 HYIQ5T013 277 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 EXOC8Q8IYI6 725 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 USP38Q8NB14 1042 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 DBF4BQ8NFT6 615 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 PIGOQ8TEQ8 1089 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 AK8Q96MA6 479 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 ADAMTS10Q9H324 1103 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 CDHR5Q9HBB8 845 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 ZDHHC9Q9Y397 364 aa21.36■■□□□ 1.01
DDX55-211ENST00000544429 GBF1Q92538 1859 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 VWA3AA6NCI4 1184 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 BRD1O95696 1058 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 VTNP04004 478 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 CDC25AP30304 524 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 GRIN1Q05586 938 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 XKR9Q5GH70 373 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 TSHZ1Q6ZSZ6 1077 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 TMEM40Q8WWA1 233 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 NACC1Q96RE7 527 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 JPH2Q9BR39 696 aaPredicted RBP21.35■■□□□ 1.01
DDX55-211ENST00000544429 AGO3Q9H9G7 860 aaKnown RBP21.35■■□□□ 1.01
DDX55-211ENST00000544429 XPNPEP1Q9NQW7 623 aa21.35■■□□□ 1.01
DDX55-211ENST00000544429 ABHD14A-ACY1A0A1B0GW23 586 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 SOX1O00570 391 aaPredicted RBP21.34■■□□□ 1.01
DDX55-211ENST00000544429 GAS2O43903 313 aaKnown RBP21.34■■□□□ 1.01
DDX55-211ENST00000544429 GHRP10912 638 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 ACTN1P12814 892 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 DDIT3P35638 169 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 CCT6AP40227 531 aaKnown RBP21.34■■□□□ 1.01
DDX55-211ENST00000544429 FXR1P51114 621 aaKnown RBP eCLIP21.34■■□□□ 1.01
DDX55-211ENST00000544429 GPC3P51654 580 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 CRYBB1P53674 252 aaPredicted RBP21.34■■□□□ 1.01
DDX55-211ENST00000544429 SLC39A14Q15043 492 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 SNX29Q8TEQ0 813 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 SLC7A3Q8WY07 619 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 MAP7D2Q96T17 732 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 IFIH1Q9BYX4 1025 aaKnown RBP21.34■■□□□ 1.01
DDX55-211ENST00000544429 SUGCTQ9HAC7 445 aa21.34■■□□□ 1.01
DDX55-211ENST00000544429 FBXO2Q9UK22 296 aaPredicted RBP21.34■■□□□ 1.01
DDX55-211ENST00000544429 A0A087WWV3 80 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 M0QZ92 97 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 SLC26A4O43511 780 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 LONP1P36776 959 aaKnown RBP21.33■■□□□ 1.01
DDX55-211ENST00000544429 POLGP54098 1239 aaPredicted RBP21.33■■□□□ 1.01
DDX55-211ENST00000544429 EMC2Q15006 297 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 KIZQ2M2Z5 673 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 KRT79Q5XKE5 535 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 KCTD17Q8N5Z5 321 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 SEPT8Q92599 483 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 APBB2Q92870 758 aa21.33■■□□□ 1.01
DDX55-211ENST00000544429 MTIF3Q9H2K0 278 aaKnown RBP21.33■■□□□ 1.01
DDX55-211ENST00000544429 SRPRBQ9Y5M8 271 aaKnown RBP21.33■■□□□ 1.01
DDX55-211ENST00000544429 EFCAB14O75071 495 aa21.32■■□□□ 1
DDX55-211ENST00000544429 DGAT1O75907 488 aa21.32■■□□□ 1
DDX55-211ENST00000544429 NLRP11P59045 1033 aaKnown RBP21.32■■□□□ 1
DDX55-211ENST00000544429 WDR5P61964 334 aaKnown RBP21.32■■□□□ 1
DDX55-211ENST00000544429 SMAD3P84022 425 aaKnown RBP21.32■■□□□ 1
DDX55-211ENST00000544429 CDC42EP1Q00587 391 aa21.32■■□□□ 1
DDX55-211ENST00000544429 FAM109BQ6ICB4 259 aaPredicted RBP21.32■■□□□ 1
DDX55-211ENST00000544429 FAM43BQ6ZT52 329 aaPredicted RBP21.32■■□□□ 1
DDX55-211ENST00000544429 LINC00301Q8NCQ3 95 aa21.32■■□□□ 1
DDX55-211ENST00000544429 PNMA5Q96PV4 448 aa21.32■■□□□ 1
DDX55-211ENST00000544429 KIAA1024Q9UPX6 916 aa21.32■■□□□ 1
DDX55-211ENST00000544429 AKT3Q9Y243 479 aa21.32■■□□□ 1
DDX55-211ENST00000544429 DNM2P50570 870 aa21.31■■□□□ 1
DDX55-211ENST00000544429 GRB10Q13322 594 aa21.31■■□□□ 1
DDX55-211ENST00000544429 IKBKEQ14164 716 aa21.31■■□□□ 1
DDX55-211ENST00000544429 PHOSPHO2Q8TCD6 241 aa21.31■■□□□ 1
DDX55-211ENST00000544429 OSMRQ99650 979 aa21.31■■□□□ 1
DDX55-211ENST00000544429 ERVK-5Q9HDB9 667 aa21.31■■□□□ 1
DDX55-211ENST00000544429 DDX19AQ9NUU7 478 aaKnown RBP21.31■■□□□ 1
DDX55-211ENST00000544429 SUCLA2Q9P2R7 463 aaPredicted RBP21.31■■□□□ 1
DDX55-211ENST00000544429 PADI3Q9ULW8 664 aa21.31■■□□□ 1
DDX55-211ENST00000544429 SLC4A7Q9Y6M7 1214 aa21.31■■□□□ 1
DDX55-211ENST00000544429 TTC3P53804 2025 aa21.31■■□□□ 1
DDX55-211ENST00000544429 CD52P31358 61 aa21.3■■□□□ 1
DDX55-211ENST00000544429 CEBPZQ03701 1054 aaKnown RBP21.3■■□□□ 1
DDX55-211ENST00000544429 TMEM119Q4V9L6 283 aa21.3■■□□□ 1
DDX55-211ENST00000544429 FOXD4L5Q5VV16 416 aaPredicted RBP21.3■■□□□ 1
DDX55-211ENST00000544429 ATL3Q6DD88 541 aa21.3■■□□□ 1
DDX55-211ENST00000544429 KCNK18Q7Z418 384 aa21.3■■□□□ 1
DDX55-211ENST00000544429 ZNF410Q86VK4 478 aa21.3■■□□□ 1
DDX55-211ENST00000544429 PRPF31Q8WWY3 499 aaKnown RBP21.3■■□□□ 1
DDX55-211ENST00000544429 FOXD4L4Q8WXT5 416 aaPredicted RBP21.3■■□□□ 1
DDX55-211ENST00000544429 ZNF396Q96N95 335 aaPredicted RBP21.3■■□□□ 1
DDX55-211ENST00000544429 MTRQ99707 1265 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms