RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PPP1R37O75864 691 aa19.37■□□□□ 0.69
SCARB1-208ENST00000544327 FLOT1O75955 427 aa19.37■□□□□ 0.69
SCARB1-208ENST00000544327 SYF2O95926 243 aaKnown RBP19.37■□□□□ 0.69
SCARB1-208ENST00000544327 EZH2Q15910 746 aaKnown RBP19.37■□□□□ 0.69
SCARB1-208ENST00000544327 SLC30A10Q6XR72 485 aa19.37■□□□□ 0.69
SCARB1-208ENST00000544327 HS2ST1Q7LGA3 356 aa19.37■□□□□ 0.69
SCARB1-208ENST00000544327 HDAC7Q8WUI4 952 aa19.37■□□□□ 0.69
SCARB1-208ENST00000544327 RBM12Q9NTZ6 932 aaKnown RBP19.37■□□□□ 0.69
SCARB1-208ENST00000544327 AJAP1Q9UKB5 411 aaPredicted RBP19.37■□□□□ 0.69
SCARB1-208ENST00000544327 ZNRF3Q9ULT6 936 aa19.37■□□□□ 0.69
SCARB1-208ENST00000544327 ZNF536O15090 1300 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 ZBTB39O15060 712 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 CLSTN1O94985 981 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 MAPTP10636 758 aaKnown RBP19.36■□□□□ 0.69
SCARB1-208ENST00000544327 GYS2P54840 703 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 UBXN2AP68543 259 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 ZC2HC1CQ53FD0 456 aaPredicted RBP19.36■□□□□ 0.69
SCARB1-208ENST00000544327 VPS36Q86VN1 386 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 CDAN1Q8IWY9 1227 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 SAMD3Q8N6K7 520 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 PSMB7Q99436 277 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 LXNQ9BS40 222 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
SCARB1-208ENST00000544327 AGPAT3Q9NRZ7 376 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 FBXO28Q9NVF7 368 aa19.36■□□□□ 0.69
SCARB1-208ENST00000544327 ZBTB12Q9Y330 459 aaPredicted RBP19.36■□□□□ 0.69
SCARB1-208ENST00000544327 ERICH4A6NGS2 130 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 FMO5P49326 533 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 MAPK7Q13164 816 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 EMBQ6PCB8 327 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 FMNL3Q8IVF7 1028 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 CAVIN3Q969G5 261 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 GLIS2Q9BZE0 524 aaPredicted RBP19.35■□□□□ 0.69
SCARB1-208ENST00000544327 POLD4Q9HCU8 107 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 SMARCAL1Q9NZC9 954 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 EHD2Q9NZN4 543 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 CALCOCO1Q9P1Z2 691 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.35■□□□□ 0.69
SCARB1-208ENST00000544327 ARHGEF35A5YM69 484 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 FTCDO95954 541 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 ITGB5P18084 799 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 KCNA3P22001 575 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 STAT1P42224 750 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 EPHB4P54760 987 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 NNTQ13423 1086 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 ALCAMQ13740 583 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 ZYXQ15942 572 aaKnown RBP19.35■□□□□ 0.69
SCARB1-208ENST00000544327 C8orf74Q6P047 294 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 ALKBH5Q6P6C2 394 aaKnown RBP19.35■□□□□ 0.69
SCARB1-208ENST00000544327 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 GSPT2Q8IYD1 628 aaKnown RBP19.35■□□□□ 0.69
SCARB1-208ENST00000544327 LRRC57Q8N9N7 239 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 CLEC4DQ8WXI8 215 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 STK33Q9BYT3 514 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 GINM1Q9NU53 330 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 MAP3K20Q9NYL2 800 aaKnown RBP19.35■□□□□ 0.69
SCARB1-208ENST00000544327 CCPG1Q9ULG6 757 aa19.35■□□□□ 0.69
SCARB1-208ENST00000544327 MYH11P35749 1972 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 A0A0U1RQG5 324 aaPredicted RBP19.34■□□□□ 0.69
SCARB1-208ENST00000544327 WDR46O15213 610 aaKnown RBP19.34■□□□□ 0.69
SCARB1-208ENST00000544327 ENOX2Q16206 610 aaKnown RBP19.34■□□□□ 0.69
SCARB1-208ENST00000544327 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 ODR4Q5SWX8 454 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 MCF2L2Q86YR7 1114 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 NIM1KQ8IY84 436 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 LPAR1Q92633 364 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 MS4A14Q96JA4 679 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 PBKQ96KB5 322 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 GDF3Q9NR23 364 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 DBR1Q9UK59 544 aaKnown RBP19.34■□□□□ 0.69
SCARB1-208ENST00000544327 FRMD4BQ9Y2L6 1034 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 UBIAD1Q9Y5Z9 338 aa19.34■□□□□ 0.69
SCARB1-208ENST00000544327 PHF20L1A8MW92 1017 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 HIP1RO75146 1068 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 LYPLA2O95372 231 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 INPP5BP32019 993 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 SOX5P35711 763 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 NPEPPSP55786 919 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 COG2Q14746 738 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 TNIP1Q15025 636 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 SLFN11Q7Z7L1 901 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 DAW1Q8N136 415 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 PRPF38AQ8NAV1 312 aaKnown RBP19.33■□□□□ 0.69
SCARB1-208ENST00000544327 SLC30A5Q8TAD4 765 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 OLIG1Q8TAK6 271 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 AGBL1Q96MI9 1066 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 COL20A1Q9P218 1284 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 TMEM59LQ9UK28 342 aa19.33■□□□□ 0.69
SCARB1-208ENST00000544327 F8VZ95 297 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 AGPSO00116 658 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 DDX3XO00571 662 aaKnown RBP eCLIP19.32■□□□□ 0.682e-7■□□□□ 10.7
SCARB1-208ENST00000544327 DHX15O43143 795 aaKnown RBP19.32■□□□□ 0.68
SCARB1-208ENST00000544327 RNF40O75150 1001 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 KIF4AO95239 1232 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 P4HBP07237 508 aaKnown RBP19.32■□□□□ 0.68
SCARB1-208ENST00000544327 RFX1P22670 979 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 RPS6KA1Q15418 735 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 PCNX4Q63HM2 1172 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 MIER3Q7Z3K6 550 aa19.32■□□□□ 0.68
SCARB1-208ENST00000544327 C12orf56Q8IXR9 622 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms