RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 MYOCDQ8IZQ8 938 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 MAFAQ8NHW3 353 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TNFRSF25Q93038 417 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 TOP1MTQ969P6 601 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 UPF2Q9HAU5 1272 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 KCNMB3Q9NPA1 279 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 INSL6Q9Y581 213 aa10.96□□□□□ -0.65
TNFRSF1A-214ENST00000543048 IGSF9BQ9UPX0 1349 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 A0A0C4DFX4 3053 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RBAK-RBAKDNI3L0D1 243 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ZNF862O60290 1169 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 UPP2O95045 317 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 C22orf31O95567 290 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 OATP04181 439 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 IGFBP4P22692 258 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TMOD1P28289 359 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FOSBP53539 338 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EFCAB12Q6NXP0 572 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 HAS1Q92839 578 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 NIFKQ9BYG3 293 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 AGO3Q9H9G7 860 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PRUNE2Q8WUY3 3088 aa10.95□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LCHNA4D1U4 455 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 DDX11L8A8MPP1 907 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 STBD1O95210 358 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CD52P31358 61 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CRYBB1P53674 252 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PSMC5P62195 406 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 HMGN5P82970 282 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 HTRA4P83105 476 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PRKCEQ02156 737 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PPP2R5CQ13362 524 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ADGRE1Q14246 886 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 UGCGQ16739 394 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 XKR3Q5GH77 459 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ODR4Q5SWX8 454 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RTN4RL1Q86UN2 441 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SLFN12Q8IYM2 578 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ARNTL2Q8WYA1 636 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 C8orf76Q96K31 380 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FTHL17Q9BXU8 183 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CERS4Q9HA82 394 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 VAV3Q9UKW4 847 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RALGAPA2Q2PPJ7 1873 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LINC01553A4QN01 128 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RFXAPO00287 272 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EML1O00423 815 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 POU3F3P20264 500 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 QARSP47897 775 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ERVK-21P61565 698 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 GUCY1B3Q02153 619 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PAK2Q13177 524 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EPHA7Q15375 998 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TARBP2Q15633 366 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FAM184AQ8NB25 1140 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FBXO18Q8NFZ0 1043 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TGS1Q96RS0 853 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PCDHA12Q9UN75 941 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 GINS2Q9Y248 185 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 NOC2LQ9Y3T9 749 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EYSQ5T1H1 3165 aa10.93□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MYO7AQ13402 2215 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 GPR182O15218 404 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 GPR32O75388 356 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 RPS6KA5O75582 802 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 VTNP04004 478 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CDC42EP1Q00587 391 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 TBC1D8BQ0IIM8 1120 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 NFX1Q12986 1120 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CALCRLQ16602 461 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 KIZQ2M2Z5 673 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MTERF2Q49AM1 385 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 LINC01465Q8N7H1 131 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 BANK1Q8NDB2 785 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 PPM1EQ8WY54 764 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 YME1L1Q96TA2 773 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 FOXP1Q9H334 677 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ERVK-5Q9HDB9 667 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 AKT3Q9Y243 479 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 REV3LO60673 3130 aa10.92□□□□□ -0.66
TNFRSF1A-214ENST00000543048 EPOPA6NHQ4 379 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 ATP2B1P20020 1258 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 MCM2P49736 904 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 DNM2P50570 870 aa10.91□□□□□ -0.66
TNFRSF1A-214ENST00000543048 CLCN3P51790 818 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms