RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 EMC2Q15006 297 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 STK38Q15208 465 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 SF3A1Q15459 793 aaKnown RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 TARBP2Q15633 366 aaKnown RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZRSR1Q15695 479 aaKnown RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 KIZQ2M2Z5 673 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 PLEKHG4Q58EX7 1191 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 FBXO47Q5MNV8 452 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 POTEGQ6S5H5 508 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 ANO5Q75V66 913 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZNF410Q86VK4 478 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 KIAA0319LQ8IZA0 1049 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 LRRC71Q8N4P6 559 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 KCTD17Q8N5Z5 321 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 IGSF22Q8N9C0 903 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 MCPH1Q8NEM0 835 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 PHOSPHO2Q8TCD6 241 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZBTB10Q96DT7 871 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 CALML4Q96GE6 196 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 NLRP4Q96MN2 994 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 PPP1R16BQ96T49 567 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 MTRQ99707 1265 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 HSD17B14Q9BPX1 270 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 FTHL17Q9BXU8 183 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 GCOM2Q9BZD3 368 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 INO80BQ9C086 356 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 NT5C3AQ9H0P0 336 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 ATP6V0A4Q9HBG4 840 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 PCDH10Q9P2E7 1040 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 SUCLA2Q9P2R7 463 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 DBR1Q9UK59 544 aaKnown RBP6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 DNM3Q9UQ16 869 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 ATP6V1DQ9Y5K8 247 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 DOCK5Q9H7D0 1870 aa6.02□□□□□ -1.45
HMGB1P40-201ENST00000525121 TANC1Q9C0D5 1861 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 DENND3A2RUS2 1198 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM150BA6NC51 233 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 ASAP2O43150 1006 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 USO1O60763 962 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 MED24O75448 989 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 F13A1P00488 732 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZSCAN20P17040 1043 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 SFPQP23246 707 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 CD52P31358 61 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 LONP1P36776 959 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 PHKA2P46019 1235 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 RARRES1P49788 294 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 GPC3P51654 580 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 NPEPPSP55786 919 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 NLRP11P59045 1033 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 WDR5P61964 334 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 CEBPZQ03701 1054 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 NCBP1Q09161 790 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 MGAT3Q09327 533 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 NFX1Q12986 1120 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 MXD4Q14582 209 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 LPIN1Q14693 890 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 MBTPS1Q14703 1052 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZNF697Q5TEC3 545 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 FOXD4L5Q5VV16 416 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 ATL3Q6DD88 541 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 GPR153Q6NV75 609 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 TRAF7Q6Q0C0 670 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 C16orf59Q7L2K0 433 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 CABP7Q86V35 215 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 CATSPER3Q86XQ3 398 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 RHPN2Q8IUC4 686 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 MYOCDQ8IZQ8 938 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 C4orf32Q8N8J7 132 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 DBF4BQ8NFT6 615 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 PIGOQ8TEQ8 1089 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 FOXD4L4Q8WXT5 416 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 OSMRQ99650 979 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 SH2D3AQ9BRG2 576 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 DHX33Q9H6R0 707 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 BMP2KQ9NSY1 1161 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 DDX19AQ9NUU7 478 aaKnown RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 WRAP73Q9P2S5 460 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 CCDC39Q9UFE4 941 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 CFAP45Q9UL16 551 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 KIAA1024Q9UPX6 916 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 COL4A3BPQ9Y5P4 624 aa6.01□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM265A0A087WTH1 108 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 IGKV6-21A0A0C4DH24 114 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 TLL1O43897 1013 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 ERLIN2O94905 339 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 STBD1O95210 358 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 YEATS4O95619 227 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 EYA4O95677 639 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 STAG3L1P0CL83 205 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 SPATA31C1P0DKV0 1188 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 DARSP14868 501 aaKnown RBP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 NCLP19338 710 aaKnown RBP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 EIF4BP23588 611 aaKnown RBP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 DNAJB2P25686 324 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 FXR1P51114 621 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 LAMTOR4Q0VGL1 99 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 PPP2R5AQ15172 486 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM132AQ24JP5 1023 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms