RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 LRFN3Q9BTN0 628 aa7.06□□□□□ -1.28
CHD1-208ENST00000512392 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
CHD1-208ENST00000512392 CCDC68Q9H2F9 335 aa7.06□□□□□ -1.28
CHD1-208ENST00000512392 TRPV4Q9HBA0 871 aa7.06□□□□□ -1.28
CHD1-208ENST00000512392 ZNF214Q9UL59 606 aaPredicted RBP7.06□□□□□ -1.28
CHD1-208ENST00000512392 CORINQ9Y5Q5 1042 aa7.06□□□□□ -1.28
CHD1-208ENST00000512392 FAM227AF5H4B4 570 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 STXBP3O00186 592 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 CBX4O00257 560 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 SMNDC1O75940 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHD1-208ENST00000512392 CLTBP09497 229 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 NME1P15531 152 aaKnown RBP7.05□□□□□ -1.28
CHD1-208ENST00000512392 PHKA1P46020 1223 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 GPR3P46089 330 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 ARL4CP56559 192 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 PDE4BQ07343 736 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 PRKG1Q13976 671 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 SHROOM1Q2M3G4 852 aaPredicted RBP7.05□□□□□ -1.28
CHD1-208ENST00000512392 LRRFIP1Q32MZ4 808 aaKnown RBP7.05□□□□□ -1.28
CHD1-208ENST00000512392 SLC30A6Q6NXT4 461 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 STK35Q8TDR2 534 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 CEP95Q96GE4 821 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 TREX2Q9BQ50 279 aaPredicted RBP7.05□□□□□ -1.28
CHD1-208ENST00000512392 TXLNGYQ9BZA5 131 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 ACAD9Q9H845 621 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 KCTD5Q9NXV2 234 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 H2AFY2Q9P0M6 372 aaPredicted RBP7.05□□□□□ -1.28
CHD1-208ENST00000512392 MAGED2Q9UNF1 606 aaPredicted RBP7.05□□□□□ -1.28
CHD1-208ENST00000512392 PCDHA9Q9Y5H5 950 aa7.05□□□□□ -1.28
CHD1-208ENST00000512392 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 TRAF5O00463 557 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 DDX3XO00571 662 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHD1-208ENST00000512392 EFCAB14O75071 495 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 URI1O94763 535 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 TPPPO94811 219 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 HTR3BO95264 441 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 HNRNPLP14866 589 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHD1-208ENST00000512392 AFF1P51825 1210 aaKnown RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 RPL6Q02878 288 aaKnown RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 PPP2R3AQ06190 1150 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 SF1Q15637 639 aaKnown RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 NTRK3Q16288 839 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 INTS3Q68E01 1043 aaKnown RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 NPNTQ6UXI9 565 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 RFX8Q6ZV50 586 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 CPOQ8IVL8 374 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 TRAPPC12Q8WVT3 735 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 TRIM11Q96F44 468 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ZKSCAN3Q9BRR0 538 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 RASSF4Q9H2L5 321 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 SERPINB13Q9UIV8 391 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 SRPK3Q9UPE1 567 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 RRP7AQ9Y3A4 280 aaKnown RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 RHPN2P1A8MT19 583 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 GNB5O14775 395 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 B3GALT2O43825 422 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 DLX3O60479 287 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 SKAP2O75563 359 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 GOSR1O95249 250 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 CCDC159P0C7I6 412 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 HOXD13P35453 343 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 LIMK1P53667 647 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ATP11AP98196 1134 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 KIAA2012Q0VF49 1180 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 MOGSQ13724 837 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 COL9A3Q14050 684 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 SEMA3AQ14563 771 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 GRIK5Q16478 980 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ARL13BQ3SXY8 428 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 HSF5Q4G112 596 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 METTL24Q5JXM2 366 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 C8orf86Q6ZUL3 223 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 LRRTM4Q86VH4 590 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ATG16L2Q8NAA4 619 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 FAM13CQ8NE31 585 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 MOGAT1Q96PD6 335 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 OSMRQ99650 979 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 C7orf25Q9BPX7 421 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 DEF6Q9H4E7 631 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 GPN3Q9UHW5 284 aaPredicted RBP7.04□□□□□ -1.28
CHD1-208ENST00000512392 DENND2AQ9ULE3 1009 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 ASXL2Q76L83 1435 aa7.04□□□□□ -1.28
CHD1-208ENST00000512392 CNTNAP5Q8WYK1 1306 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 NFKBIEO00221 500 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ADAMTS3O15072 1205 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ULK1O75385 1050 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 UBXN7O94888 489 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 EPHX1P07099 455 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ATP2A2P16615 1042 aaKnown RBP7.03□□□□□ -1.28
CHD1-208ENST00000512392 ITPKAP23677 461 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 HADHAP40939 763 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 LSSP48449 732 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 ITGA8P53708 1063 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 CLNS1AP54105 237 aaKnown RBP7.03□□□□□ -1.28
CHD1-208ENST00000512392 MECOMQ03112 1051 aa7.03□□□□□ -1.28
CHD1-208ENST00000512392 PPA1Q15181 289 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms