RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 TCFL5Q9UL49 500 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 MAP3K15Q6ZN16 1313 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 H3BS24 57 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 WNT9AO14904 365 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 GPR39O43194 453 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
RFC1-213ENST00000512275 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
RFC1-213ENST00000512275 NEXNQ0ZGT2 675 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 PIK3R6Q5UE93 754 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 MBLAC2Q68D91 279 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 IQCEQ6IPM2 695 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 RNF111Q6ZNA4 994 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 RCBTB1Q8NDN9 531 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 JDP2Q8WYK2 163 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 PCMTD2Q9NV79 361 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 SAMD15Q9P1V8 674 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 G3BP2Q9UN86 482 aaKnown RBP8.62□□□□□ -1.03
RFC1-213ENST00000512275 LAMB2P55268 1798 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
RFC1-213ENST00000512275 TRBV23OR9-2A0A075B6M9 112 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 TMEM82A0PJX8 343 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 CBX4O00257 560 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 BRINP1O60477 761 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 GLRX3O76003 335 aaKnown RBP8.61□□□□□ -1.03
RFC1-213ENST00000512275 IGKV5-2P06315 115 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 CKMP06732 381 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 STAT4Q14765 748 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 HLFQ16534 295 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 DDX53Q86TM3 631 aaKnown RBP8.61□□□□□ -1.03
RFC1-213ENST00000512275 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 LINS1Q8NG48 757 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 PCDH19Q8TAB3 1148 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 SHKBP1Q8TBC3 707 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 PTCHD1Q96NR3 888 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 CHMP4BQ9H444 224 aaKnown RBP8.61□□□□□ -1.03
RFC1-213ENST00000512275 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 ZSWIM5Q9P217 1185 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 ZNF281Q9Y2X9 895 aa8.61□□□□□ -1.03
RFC1-213ENST00000512275 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 DDX60Q8IY21 1712 aaKnown RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 PITPNM2Q9BZ72 1349 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 SPEF2Q9C093 1822 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 NPHP3-ACAD11A0A0J9YXS1 232 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 NBPF7P0C2Y1 421 aaPredicted RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 UBTFL1P0CB47 393 aaPredicted RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 PAMP19021 973 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 ENDOUP21128 410 aaKnown RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 GPTP24298 496 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 SSTR4P31391 388 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 GUCY2FP51841 1108 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 INF2Q27J81 1249 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 RNF219Q5W0B1 726 aaPredicted RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 ARHGAP27Q6ZUM4 889 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 AMIGO3Q86WK7 504 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 UBE2FQ969M7 185 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 WNK4Q96J92 1243 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 OSBPL1AQ9BXW6 950 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 CELF4Q9BZC1 486 aaKnown RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 USP44Q9H0E7 712 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 C9orf78Q9NZ63 289 aaPredicted RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 PCDHA11Q9Y5I1 949 aa8.6□□□□□ -1.03
RFC1-213ENST00000512275 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
RFC1-213ENST00000512275 GRM8O00222 908 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 PLSCR1O15162 318 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 RPS6KA4O75676 772 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 CAMTA2O94983 1202 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 IGHDP01880 384 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 GNAI2P04899 355 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 GNAI3P08754 354 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 DSG1Q02413 1049 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 TEKQ02763 1124 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 PAK1Q13153 545 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 TCIRG1Q13488 830 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 GCKRQ14397 625 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 KIZQ2M2Z5 673 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 SKOR2Q2VWA4 1001 aaPredicted RBP8.59□□□□□ -1.03
RFC1-213ENST00000512275 OR2W6PQ8NHA6 318 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 ALG1Q9BT22 464 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 ASPSCR1Q9BZE9 553 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 SRP68Q9UHB9 627 aaKnown RBP8.59□□□□□ -1.03
RFC1-213ENST00000512275 SNX11Q9Y5W9 270 aa8.59□□□□□ -1.03
RFC1-213ENST00000512275 NEMP1O14524 444 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 GSC2O15499 205 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 ZEB2O60315 1214 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 F2P00734 622 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 ESR1P03372 595 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 CD97P48960 835 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 MECP2P51608 486 aaKnown RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 EZH2Q15910 746 aaKnown RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 IFI16Q16666 785 aaKnown RBP8.58□□□□□ -1.04
RFC1-213ENST00000512275 ZNF827Q17R98 1081 aa8.58□□□□□ -1.04
RFC1-213ENST00000512275 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms