RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TCP11X1B4DZS4 312 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 SLC8A3P57103 927 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 CDR2Q01850 454 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 RFFLQ8WZ73 363 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 FGD4Q96M96 766 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 PPP1R12AO14974 1030 aaPredicted RBP18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 YWHAGP61981 247 aaKnown RBP eCLIP18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 CDK17Q00537 523 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 LLGL1Q15334 1064 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 MFSD14BQ5SR56 506 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 CASC4Q6P4E1 433 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 CCDC127Q96BQ5 260 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 C7orf25Q9BPX7 421 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 ZNF804BA4D1E1 1349 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 KIAA1755Q5JYT7 1200 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 RNF207Q6ZRF8 634 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 MIER3Q7Z3K6 550 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 AGGF1Q8N302 714 aaeCLIP18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 NSMCE1Q8WV22 266 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 MLXIPLQ9NP71 852 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 DNAJC17Q9NVM6 304 aaKnown RBP18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 COMMD10Q9Y6G5 202 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 SGK1O00141 431 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 TTI1O43156 1089 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 HARSP12081 509 aaKnown RBP18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 HSD17B3P37058 310 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 MOV10L1Q9BXT6 1211 aaKnown RBP18.5■□□□□ 0.55
HMGXB3-201ENST00000502717 GPC5P78333 572 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 KLC1Q07866 573 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 COA7Q96BR5 231 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 IPO5O00410 1097 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 PRPF6O94906 941 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 ZWINTO95229 277 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 SCTRP47872 440 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 MORC4Q8TE76 937 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 FAM81BQ96LP2 452 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 HNRNPCL1O60812 293 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 PLS3P13797 630 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 BRD2P25440 801 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 ZNF211Q13398 564 aaPredicted RBP18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 USP17L2Q6R6M4 530 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 CENPUQ71F23 418 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 FBXO11Q86XK2 927 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 INTUQ9ULD6 942 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 AFF2P51816 1311 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 HAUS5O94927 633 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 CD19P15391 556 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 PPP1R2P3Q6NXS1 205 aa18.49■□□□□ 0.55
HMGXB3-201ENST00000502717 BTDP43251 543 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 HERVK_113P62684 666 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 NT5DC1Q5TFE4 455 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 CCDC137Q6PK04 289 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 TMBIM4Q9HC24 238 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 MRPL47Q9HD33 250 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 WDR91A4D1P6 747 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 FSBPO95073 299 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 MRPS35P82673 323 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 FIGNQ5HY92 759 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 CNPY4Q8N129 248 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 A0A0G2JND7 137 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 LPXNO60711 386 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 PDE1CQ14123 709 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 NAALADL2Q58DX5 795 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 SWT1Q5T5J6 900 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 TTC25Q96NG3 672 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 BARHL2Q9NY43 387 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 POTEMA6NI47 508 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 SPAG7O75391 227 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 GMNNO75496 209 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 USP17L8P0C7I0 530 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 ILDR1Q86SU0 546 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 HAUS1Q96CS2 278 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 DTNBP1Q96EV8 351 aa18.48■□□□□ 0.55
HMGXB3-201ENST00000502717 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 ZBED4O75132 1171 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 DNAJC8O75937 253 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 SKOR1P84550 965 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 ARHGAP4P98171 946 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 ANKS1AQ92625 1134 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 LACRTQ9GZZ8 138 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 KDM4CQ9H3R0 1056 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 STK4Q13043 487 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 NLRP7Q8WX94 980 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 OLFM3Q96PB7 478 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 TMEM206Q9H813 350 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 ATP6V0A4Q9HBG4 840 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 PARVGQ9HBI0 331 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 NR3C1P04150 777 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 SARSP49591 514 aaKnown RBP18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 CC2D2BQ6DHV5 1058 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 PFASO15067 1338 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms