RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
YIF1A-209ENST00000494836 RFC5P40937 340 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 DNM2P50570 870 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 LPIN1Q14693 890 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 KRT79Q5XKE5 535 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 POTEGQ6S5H5 508 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
YIF1A-209ENST00000494836 DBF4BQ8NFT6 615 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 PIGOQ8TEQ8 1089 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 NACC1Q96RE7 527 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 IFIH1Q9BYX4 1025 aaKnown RBP18.13■□□□□ 0.49
YIF1A-209ENST00000494836 OSBPL7Q9BZF2 842 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 SLC4A7Q9Y6M7 1214 aa18.13■□□□□ 0.49
YIF1A-209ENST00000494836 PP2D1A8MPX8 630 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 XRCC6P12956 609 aaKnown RBP eCLIP18.12■□□□□ 0.49
YIF1A-209ENST00000494836 MUTP22033 750 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 IKBKEQ14164 716 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 KIZQ2M2Z5 673 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 FOXD4L5Q5VV16 416 aaPredicted RBP18.12■□□□□ 0.49
YIF1A-209ENST00000494836 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 ZNF710Q8N1W2 664 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 USP38Q8NB14 1042 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 FOXD4L4Q8WXT5 416 aaPredicted RBP18.12■□□□□ 0.49
YIF1A-209ENST00000494836 APBB2Q92870 758 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 PPP1R16BQ96T49 567 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 DHX33Q9H6R0 707 aaKnown RBP18.12■□□□□ 0.49
YIF1A-209ENST00000494836 CLIC4Q9Y696 253 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 SQORQ9Y6N5 450 aa18.12■□□□□ 0.49
YIF1A-209ENST00000494836 ABHD14A-ACY1A0A1B0GW23 586 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 EFCAB14O75071 495 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 F13A1P00488 732 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 KCNJ6P48051 423 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 RARRES1P49788 294 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 NLRP11P59045 1033 aaKnown RBP18.11■□□□□ 0.49
YIF1A-209ENST00000494836 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
YIF1A-209ENST00000494836 MKRN4PQ13434 485 aaPredicted RBP18.11■□□□□ 0.49
YIF1A-209ENST00000494836 DRP2Q13474 957 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 PKP1Q13835 747 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 EMC2Q15006 297 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 TCTN1Q2MV58 587 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 AK8Q96MA6 479 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 SCLT1Q96NL6 688 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 BMP2KQ9NSY1 1161 aaPredicted RBP18.11■□□□□ 0.49
YIF1A-209ENST00000494836 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
YIF1A-209ENST00000494836 A0A087WWV3 80 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 RBAK-RBAKDNI3L0D1 243 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 SOX1O00570 391 aaPredicted RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 GAS2O43903 313 aaKnown RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 GPR32O75388 356 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 DGAT1O75907 488 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 CDC25AP30304 524 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 CRYBB1P53674 252 aaPredicted RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 WDR5P61964 334 aaKnown RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 PAK2Q13177 524 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 PTPAQ15257 358 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 ZNF396Q96N95 335 aaPredicted RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 USP28Q96RU2 1077 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 OSMRQ99650 979 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 AGO3Q9H9G7 860 aaKnown RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 SUCLA2Q9P2R7 463 aaPredicted RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 DBR1Q9UK59 544 aaKnown RBP18.1■□□□□ 0.49
YIF1A-209ENST00000494836 KIAA1024Q9UPX6 916 aa18.1■□□□□ 0.49
YIF1A-209ENST00000494836 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 ATP2A2P16615 1042 aaKnown RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 CD52P31358 61 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 GPC3P51654 580 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 SMAD3P84022 425 aaKnown RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 CDC42EP1Q00587 391 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 ECM1Q16610 540 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 FAM109BQ6ICB4 259 aaPredicted RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 TMEM40Q8WWA1 233 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 TCP11Q8WWU5 503 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 NLRP7Q8WX94 980 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 SLC9A7Q96T83 725 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 MTRQ99707 1265 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 MMTAG2Q9BU76 263 aaKnown RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 ADAMTS10Q9H324 1103 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 CDHR5Q9HBB8 845 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 ATP6V0A4Q9HBG4 840 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 DDX19AQ9NUU7 478 aaKnown RBP18.09■□□□□ 0.49
YIF1A-209ENST00000494836 LOXHD1Q8IVV2 1947 aa18.09■□□□□ 0.49
YIF1A-209ENST00000494836 MICAL3Q7RTP6 2002 aa18.08■□□□□ 0.49
YIF1A-209ENST00000494836 ARHGEF35A5YM69 484 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 USO1O60763 962 aaKnown RBP18.08■□□□□ 0.48
YIF1A-209ENST00000494836 RPS6KA5O75582 802 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
YIF1A-209ENST00000494836 LONP1P36776 959 aaKnown RBP18.08■□□□□ 0.48
YIF1A-209ENST00000494836 ZRSR1Q15695 479 aaKnown RBP18.08■□□□□ 0.48
YIF1A-209ENST00000494836 RHPN2Q8IUC4 686 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 PSPC1Q8WXF1 523 aaKnown RBP18.08■□□□□ 0.48
YIF1A-209ENST00000494836 TMEM143Q96AN5 459 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 CDK5RAP3Q96JB5 506 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 ZNF668Q96K58 619 aaPredicted RBP18.08■□□□□ 0.48
YIF1A-209ENST00000494836 XPNPEP1Q9NQW7 623 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 PADI3Q9ULW8 664 aa18.08■□□□□ 0.48
YIF1A-209ENST00000494836 NOC2LQ9Y3T9 749 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms