RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CLCN3P51790 818 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-219ENST00000479941 NUCB2P80303 420 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 MGAT3Q09327 533 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 MBTPS1Q14703 1052 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 GPNMBQ14956 572 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 STK38Q15208 465 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 TMEM240Q5SV17 173 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 ZNF365Q70YC5 407 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 DEFB128Q7Z7B8 93 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 LINC00301Q8NCQ3 95 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 PIGOQ8TEQ8 1089 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.489e-13■■□□□ 11.8
ATG4B-219ENST00000479941 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
ATG4B-219ENST00000479941 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
ATG4B-219ENST00000479941 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.48
ATG4B-219ENST00000479941 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 ZDHHC9Q9Y397 364 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 TRPV2Q9Y5S1 764 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 CDY2AQ9Y6F7 541 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 TANC1Q9C0D5 1861 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 SPTLC2O15270 562 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 PPP6R2O75170 966 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 TMEM62Q0P6H9 643 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 SHHQ15465 462 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 ECM1Q16610 540 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 FOXD4L6Q3SYB3 417 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 HYIQ5T013 277 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 FOXD4L3Q6VB84 417 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 CABP7Q86V35 215 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 USP38Q8NB14 1042 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 VWCEQ96DN2 955 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 TFIP11Q9UBB9 837 aaKnown RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 FBXO2Q9UK22 296 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-219ENST00000479941 DNM3Q9UQ16 869 aa12.07□□□□□ -0.48
ATG4B-219ENST00000479941 BAIAP3O94812 1187 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 VTNP04004 478 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 DDIT3P35638 169 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 CRYBB1P53674 252 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-219ENST00000479941 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
ATG4B-219ENST00000479941 GRIN1Q05586 938 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-219ENST00000479941 EMC2Q15006 297 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 C9orf50Q5SZB4 431 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 FAM43BQ6ZT52 329 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-219ENST00000479941 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 HERVK_113Q902F9 699 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 SEPT8Q92599 483 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 APBB2Q92870 758 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 MTRQ99707 1265 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 CCSER1Q9C0I3 900 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 CSRNP2Q9H175 543 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 ATP6V0A4Q9HBG4 840 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-219ENST00000479941 EVPLQ92817 2033 aa12.06□□□□□ -0.48
ATG4B-219ENST00000479941 SCN5AQ14524 2016 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 A0A087WWV3 80 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 E9PMD0 336 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 ASAP2O43150 1006 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 EFCAB14O75071 495 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 GPR32O75388 356 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 EYA4O95677 639 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 GHRP10912 638 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 TXLNAP40222 546 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 GPC3P51654 580 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 NLRP11P59045 1033 aaKnown RBP12.05□□□□□ -0.48
ATG4B-219ENST00000479941 KRT85P78386 507 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 DRP2Q13474 957 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 IKBKEQ14164 716 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 LPIN1Q14693 890 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 ZRSR1Q15695 479 aaKnown RBP12.05□□□□□ -0.48
ATG4B-219ENST00000479941 KIZQ2M2Z5 673 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 RASIP1Q5U651 963 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 PADI6Q6TGC4 694 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 TSHZ1Q6ZSZ6 1077 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 PSPC1Q8WXF1 523 aaKnown RBP12.05□□□□□ -0.48
ATG4B-219ENST00000479941 RNPC3Q96LT9 517 aaKnown RBP12.05□□□□□ -0.48
ATG4B-219ENST00000479941 PNMA5Q96PV4 448 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 IFIH1Q9BYX4 1025 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms