RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 RINLQ6ZS11 566 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CNKSR1Q969H4 720 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 PBKQ96KB5 322 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CDCA7Q9BWT1 371 aaPredicted RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 BCAS3Q9H6U6 928 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CNOT10Q9H9A5 744 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 IL17RBQ9NRM6 502 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 ANAPC4Q9UJX5 808 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 KCPQ6ZWJ8 1503 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 SLC37A4O43826 429 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 RPS6KA3P51812 740 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 EN1Q05925 392 aaPredicted RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 MPP2Q14168 576 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CNGA2Q16280 664 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 ZDHHC24Q6UX98 284 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 IRF2BP2Q7Z5L9 587 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 LONP2Q86WA8 852 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 NEK9Q8TD19 979 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 LARP4BQ92615 738 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 ZHX3Q9H4I2 956 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.61□□□□□ -1.03
TPM3-215ENST00000469717 ERVV-2B6SEH9 535 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 STXBP3O00186 592 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 TDP2O95551 362 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 MYL1P05976 194 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 USP17L8P0C7I0 530 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 KRT13P13646 458 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CCND1P24385 295 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 ICA1Q05084 483 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 KLRC3Q07444 240 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 PLS1Q14651 629 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 RBBP5Q15291 538 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 GUF1Q8N442 669 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 CNBD1Q8NA66 436 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 DDX23Q9BUQ8 820 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 GANQ9H2C0 597 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 IKZF4Q9H2S9 585 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 PAPOLBQ9NRJ5 636 aaKnown RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
TPM3-215ENST00000469717 CFAP73A6NFT4 308 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 PDE8AO60658 829 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 PLCG2P16885 1265 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 RWDD2BP57060 319 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 SESN3P58005 492 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 BNIP1Q12981 228 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 MTA1Q13330 715 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 ZNF772Q68DY9 489 aaPredicted RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 SLC30A9Q6PML9 568 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 UNC13DQ70J99 1090 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 NT5DC3Q86UY8 548 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 SUPT20HQ8NEM7 779 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 TBCKQ8TEA7 893 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 U2AF1L4Q8WU68 220 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 UCMAQ8WVF2 138 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 POP1Q99575 1024 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 MTA3Q9BTC8 594 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 PABPC3Q9H361 631 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 ETNK1Q9HBU6 452 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 BCS1LQ9Y276 419 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 PTPN22Q9Y2R2 807 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 USP15Q9Y4E8 981 aaPredicted RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 ALS2Q96Q42 1657 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 CICQ96RK0 1608 aaPredicted RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 DR1Q01658 176 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 TFAP4Q01664 338 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 GALNTL6Q49A17 601 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 RBM26Q5T8P6 1007 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 CGB2Q6NT52 195 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 DEFB132Q7Z7B7 95 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 EXOC3L1Q86VI1 746 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 CPNE8Q86YQ8 564 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 BORCS6Q96GS4 357 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 TSC22D3Q99576 134 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.6□□□□□ -1.03
TPM3-215ENST00000469717 DOCK2Q92608 1830 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 ACSL3O95573 720 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 KLRK1P26718 216 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 RPL21P46778 160 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 PAPOLAP51003 745 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 RAD23BP54727 409 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 NAPAP54920 295 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 TSHZ1Q6ZSZ6 1077 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 HOOK3Q86VS8 718 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 ZDHHC14Q8IZN3 488 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 TTC8Q8TAM2 541 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 ALG3Q92685 438 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 CENPTQ96BT3 561 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 CALML4Q96GE6 196 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 LUC7LQ9NQ29 371 aaKnown RBP8.6□□□□□ -1.03
TPM3-215ENST00000469717 ARHGEF3Q9NR81 526 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 STK32BQ9NY57 414 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 MAD2L2Q9UI95 211 aa8.6□□□□□ -1.03
TPM3-215ENST00000469717 STX8Q9UNK0 236 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms