RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 AP3B2Q13367 1082 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 KCNC3Q14003 757 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-220ENST00000464800 TYW1BQ6NUM6 668 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 MIS18BP1Q6P0N0 1132 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 LLGL2Q6P1M3 1020 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 PDXDC2PQ6P474 469 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 ABHD15Q6UXT9 468 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 NIPA1Q7RTP0 329 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 FAM228AQ86W67 206 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 APOL5Q9BWW9 433 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
MCF2L-220ENST00000464800 PLXNA3P51805 1871 aa16.62■□□□□ 0.25
MCF2L-220ENST00000464800 ZBTB42B2RXF5 422 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 hCG_1984214I3L0E3 225 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 SLC27A2O14975 620 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 HOXA2O43364 376 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 C22orf31O95567 290 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 HOXB8P17481 243 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-220ENST00000464800 PPM1AP35813 382 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 SYCE2Q6PIF2 218 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 SGMS1Q86VZ5 419 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 CKAP2LQ8IYA6 745 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 ZNF713Q8N859 430 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-220ENST00000464800 ATOH1Q92858 354 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-220ENST00000464800 TMEM117Q9H0C3 514 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
MCF2L-220ENST00000464800 RBM28Q9NW13 759 aaKnown RBP16.61■□□□□ 0.25
MCF2L-220ENST00000464800 NR2E1Q9Y466 385 aa16.61■□□□□ 0.25
MCF2L-220ENST00000464800 HIDE1A8MVS5 230 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 VTNP04004 478 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 FAM189BP81408 668 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 KRT17Q04695 432 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 DSC3Q14574 896 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 SWSAP1Q6NVH7 229 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 KCNT2Q6UVM3 1135 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 ABI1Q8IZP0 508 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 METTL13Q8N6R0 699 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-220ENST00000464800 ZNF558Q96NG5 402 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
MCF2L-220ENST00000464800 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 CACNA1HO95180 2353 aa16.6■□□□□ 0.25
MCF2L-220ENST00000464800 SMCO2A6NFE2 343 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 IPO5O00410 1097 aaKnown RBP16.59■□□□□ 0.25
MCF2L-220ENST00000464800 GPR32O75388 356 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 NUBP1P53384 320 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 MTMR3Q13615 1198 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 TPRNQ4KMQ1 711 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 CREB3L3Q68CJ9 461 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 PLA2G4DQ86XP0 818 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 CASP10Q92851 521 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 RIPOR3Q96MK2 946 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 CASD1Q96PB1 797 aa16.59■□□□□ 0.25
MCF2L-220ENST00000464800 FAM86B1E9PN63 330 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 PDGFBP01127 241 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-220ENST00000464800 FAM86B2P0C5J1 330 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 ATP4AP20648 1035 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 PBX3P40426 434 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
MCF2L-220ENST00000464800 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.24
MCF2L-220ENST00000464800 RTN1Q16799 776 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 CES5AQ6NT32 575 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 TMC7Q7Z402 723 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 UBALD2Q8IYN6 164 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 KREMEN2Q8NCW0 462 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 NECTIN4Q96NY8 510 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 MAP7D2Q96T17 732 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 RNF19AQ9NV58 838 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 SPG21Q9NZD8 308 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 CEP131Q9UPN4 1083 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 SORCS3Q9UPU3 1222 aa16.58■□□□□ 0.24
MCF2L-220ENST00000464800 USP34Q70CQ2 3546 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 IGLV3-22A0A075B6J6 115 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 H0Y858 1186 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 DHX15O43143 795 aaKnown RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 ZSCAN20P17040 1043 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 CLCN3P51790 818 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 SETQ01105 290 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 ITIH3Q06033 890 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 ZNF577Q9BSK1 485 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 AKT3Q9Y243 479 aa16.57■□□□□ 0.24
MCF2L-220ENST00000464800 MAFBQ9Y5Q3 323 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 V9GY48 417 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-220ENST00000464800 MAGEB2O15479 319 aa16.56■□□□□ 0.24
MCF2L-220ENST00000464800 ZBTB43O43298 467 aa16.56■□□□□ 0.24
MCF2L-220ENST00000464800 GALR2O43603 387 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-220ENST00000464800 PSAPP07602 524 aa16.56■□□□□ 0.24
MCF2L-220ENST00000464800 NLRP11P59045 1033 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms