RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 PUM3Q15397 648 aaKnown RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 ECM1Q16610 540 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 TRIM71Q2Q1W2 868 aaKnown RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 COL28A1Q2UY09 1125 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 METTL24Q5JXM2 366 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 TMCO4Q5TGY1 634 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 RBM23Q86U06 439 aaKnown RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 SIAH1Q8IUQ4 282 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 MYOCDQ8IZQ8 938 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 PLVAPQ9BX97 442 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 AP5M1Q9H0R1 490 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 POMKQ9H5K3 350 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 PDGFCQ9NRA1 345 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 MARK1Q9P0L2 795 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 WNT16Q9UBV4 365 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 DCTN4Q9UJW0 460 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 FBXO4Q9UKT5 387 aa6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 SPENQ96T58 3664 aaKnown RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 USP9YO00507 2555 aaPredicted RBP6.47□□□□□ -1.37
SBDSP1-204ENST00000453858 VWA5AO00534 786 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 KHNYNO15037 678 aaKnown RBP6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 PER2O15055 1255 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 ZBTB39O15060 712 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 BNIP3LO60238 219 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 ITGB1P05556 798 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 THBS1P07996 1170 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 IFIT1P09914 478 aaKnown RBP6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 ARHGAP4P98171 946 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 TDGQ13569 410 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 CNGB1Q14028 1251 aaPredicted RBP6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 CSRP2Q16527 193 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 DUSP6Q16828 381 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 CCDC27Q2M243 656 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 IQSEC1Q6DN90 963 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 ANKRD54Q6NXT1 300 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 PRR23CQ6ZRP0 262 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 FAM133AQ8N9E0 248 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 DBF4BQ8NFT6 615 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 ATRIPQ8WXE1 791 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 IL17RAQ96F46 866 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 NEK1Q96PY6 1258 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 MTG1Q9BT17 334 aaPredicted RBP6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 MYH16Q9H6N6 1097 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 TLE6Q9H808 572 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 CELSR2Q9HCU4 2923 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 GPR108Q9NPR9 543 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 SEMA4GQ9NTN9 838 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 ZSCAN32Q9NX65 697 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 DENND2AQ9ULE3 1009 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 PALD1Q9ULE6 856 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 DUSP12Q9UNI6 340 aa6.46□□□□□ -1.38
SBDSP1-204ENST00000453858 TICRRQ7Z2Z1 1910 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 FLOT1O75955 427 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 NTRK1P04629 796 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 NEFLP07196 543 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 RETP07949 1114 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 RAB3GAP1Q15042 981 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 PTGISQ16647 500 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 PLEKHG4Q58EX7 1191 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 SPECC1Q5M775 1068 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 CCDC30Q5VVM6 783 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 GDF6Q6KF10 455 aaPredicted RBP6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 PROSER1Q86XN7 944 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 DZIP1Q86YF9 867 aaKnown RBP6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 FIBCD1Q8N539 461 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 SPATA18Q8TC71 538 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 SH3RF3Q8TEJ3 882 aaPredicted RBP6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 LPIN2Q92539 896 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 P2RX5Q93086 422 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 PPP2R3CQ969Q6 453 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 SCNM1Q9BWG6 230 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 RBCK1Q9BYM8 510 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 OSBPL7Q9BZF2 842 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 SIT1Q9Y3P8 196 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 DDX49Q9Y6V7 483 aaKnown RBP6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 SDK1Q7Z5N4 2213 aa6.45□□□□□ -1.38
SBDSP1-204ENST00000453858 CRYBG3Q68DQ2 2970 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 PARP14Q460N5 1801 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 FZD6O60353 706 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 CSPG5O95196 566 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 FGFR3P22607 806 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 PHKA1P46020 1223 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 MARSP56192 900 aaKnown RBP6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 NAALADL2Q58DX5 795 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 ZNF618Q5T7W0 954 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 PDE12Q6L8Q7 609 aaKnown RBP6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 XKR5Q6UX68 686 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 SESTD1Q86VW0 696 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 TEX11Q8IYF3 940 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 RASGRP4Q8TDF6 673 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 GPR152Q8TDT2 470 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 EDEM1Q92611 657 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 WNT8BQ93098 351 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 NSUN4Q96CB9 384 aaKnown RBP6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 ZNF689Q96CS4 500 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms