RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 GSDMAQ96QA5 445 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 HSD17B14Q9BPX1 270 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 TRPV6Q9H1D0 765 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 WNT8AQ9H1J5 351 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 SPC25Q9HBM1 224 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 NCOR1O75376 2440 aa13.08□□□□□ -0.32
AC009404.1-202ENST00000439955 WDR64B1ANS9 1081 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 ATP9AO75110 1047 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 MED24O75448 989 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 SPATA31C1P0DKV0 1188 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 GJA9P57773 515 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 SV2BQ7L1I2 683 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 CATSPER3Q86XQ3 398 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 ARNTL2Q8WYA1 636 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 HLA-CQ95604 372 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 COG5Q9UP83 839 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
AC009404.1-202ENST00000439955 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 CHMP2AO43633 222 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 LYPLA2O95372 231 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 P4HBP07237 508 aaKnown RBP13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 AFMP43652 599 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 NLRP12P59046 1061 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 NEDD9Q14511 834 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 TTLL4Q14679 1199 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 ECM1Q16610 540 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 SPRED2Q7Z698 418 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 LRRC15Q8TF66 581 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 VWCEQ96DN2 955 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 SNX27Q96L92 541 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 MTRQ99707 1265 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 NOC4LQ9BVI4 516 aaKnown RBP13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 JPH1Q9HDC5 661 aaPredicted RBP13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 KIAA1024Q9UPX6 916 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 GBF1Q92538 1859 aa13.06□□□□□ -0.32
AC009404.1-202ENST00000439955 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 RBM47A0AV96 593 aaKnown RBP13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 DDX39AO00148 427 aaKnown RBP13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 B4GALT4O60513 344 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 SLITRK3O94933 977 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 EYA4O95677 639 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 PSMC6P62333 389 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 KCNB1Q14721 858 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 DEFB128Q7Z7B8 93 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 GRAMD1CQ8IYS0 662 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 CCDC47Q96A33 483 aaKnown RBP13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 DYDC2Q96IM9 177 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 PLIN2Q99541 437 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 TRIM9Q9C026 710 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 PKD2L1Q9P0L9 805 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 MAN1B1Q9UKM7 699 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
AC009404.1-202ENST00000439955 MCM3APO60318 1980 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 PVALEFA0A1B0GWK0 134 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 ATG7O95352 703 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 CCNE2O96020 404 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 XRCC6P12956 609 aaKnown RBP eCLIP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 UBA1P22314 1058 aaKnown RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 CYP4A11Q02928 519 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 CUL4BQ13620 913 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 MORC3Q14149 939 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 MCM6Q14566 821 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 KCNK18Q7Z418 384 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 SYT2Q8N9I0 419 aaPredicted RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 NACC1Q96RE7 527 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 LXNQ9BS40 222 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 NAT10Q9H0A0 1025 aaKnown RBP13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
AC009404.1-202ENST00000439955 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms