RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 ZNF703Q9H7S9 590 aaPredicted RBP6.91□□□□□ -1.3
LINC00458-202ENST00000427299 TLR9Q9NR96 1032 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 PCDHA8Q9Y5H6 950 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 CADPSQ9ULU8 1353 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 MAPKBP1O60336 1514 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 HECW1Q76N89 1606 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 PRAMEF25A6NGN4 478 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 KRT15P19012 456 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 MRE11P49959 708 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 HGFACQ04756 655 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 TMEM200BQ69YZ2 307 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 SCUBE1Q8IWY4 988 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 SMURF1Q9HCE7 757 aa6.9□□□□□ -1.3
LINC00458-202ENST00000427299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.9□□□□□ -1.31
LINC00458-202ENST00000427299 FANCD2Q9BXW9 1451 aa6.9□□□□□ -1.31
LINC00458-202ENST00000427299 A0A0G2JNJ9 132 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 CLASP2O75122 1294 aaKnown RBP6.89□□□□□ -1.31
LINC00458-202ENST00000427299 HIBADHP31937 336 aaKnown RBP6.89□□□□□ -1.31
LINC00458-202ENST00000427299 INHBCP55103 352 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 CD83Q01151 205 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 TUBA3CQ13748 450 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 SEC23AQ15436 765 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 TUBA3EQ6PEY2 450 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 OTOP2Q7RTS6 562 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 PMFBP1Q8TBY8 1022 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
LINC00458-202ENST00000427299 OSBPL2Q9H1P3 480 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 NELFAQ9H3P2 528 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 AURKAIP1Q9NWT8 199 aaPredicted RBP6.89□□□□□ -1.31
LINC00458-202ENST00000427299 SIRPGQ9P1W8 387 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 Q9UFV3 132 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 FMN1Q68DA7 1419 aa6.89□□□□□ -1.31
LINC00458-202ENST00000427299 POLR1AO95602 1720 aaPredicted RBP6.89□□□□□ -1.31
LINC00458-202ENST00000427299 LRRIQ1Q96JM4 1722 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 TOPBP1Q92547 1522 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 CASKIN1Q8WXD9 1431 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 ECE1P42892 770 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 SUMO1P63165 101 aaKnown RBP6.88□□□□□ -1.31
LINC00458-202ENST00000427299 GUCY1A3Q02108 690 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 GRM7Q14831 915 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 LRSAM1Q6UWE0 723 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 LDLRAD3Q86YD5 345 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 PUS7Q96PZ0 661 aaKnown RBP6.88□□□□□ -1.31
LINC00458-202ENST00000427299 OR10A5Q9H207 317 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 PIF1Q9H611 641 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 CEP72Q9P209 647 aa6.88□□□□□ -1.31
LINC00458-202ENST00000427299 CCDC18Q5T9S5 1454 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 CARMIL1Q5VZK9 1371 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 TRBV23-1A0A0A0MS06 115 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 PMS2P1A4D2B8 440 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 KCNK3O14649 394 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 MEOX1P50221 254 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 ST5P78524 1137 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 LACTBP83111 547 aaPredicted RBP6.87□□□□□ -1.31
LINC00458-202ENST00000427299 CRY1Q16526 586 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 FOXB2Q5VYV0 432 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 EP400NLQ6ZTU2 488 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 LRP10Q7Z4F1 713 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 ADGRE4PQ86SQ3 457 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 NOP9Q86U38 636 aaKnown RBP6.87□□□□□ -1.31
LINC00458-202ENST00000427299 OR14K1Q8NGZ2 314 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 MMRN2Q9H8L6 949 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 UCKL1Q9NWZ5 548 aa6.87□□□□□ -1.31
LINC00458-202ENST00000427299 POLA1P09884 1462 aaPredicted RBP6.86□□□□□ -1.31
LINC00458-202ENST00000427299 SETD5Q9C0A6 1442 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 A0A087X1B8 175 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 CCDC66A2RUB6 948 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 SLC26A4O43511 780 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 MMEP08473 750 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 HMGB1P09429 215 aaKnown RBP6.86□□□□□ -1.31
LINC00458-202ENST00000427299 SRGAP2CP0DJJ0 459 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 MOGSQ13724 837 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 TM4SF20Q53R12 229 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 FAM209AQ5JX71 171 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 RTKN2Q8IZC4 609 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 ZNF483Q8TF39 744 aaPredicted RBP6.86□□□□□ -1.31
LINC00458-202ENST00000427299 LARP4BQ92615 738 aaKnown RBP6.86□□□□□ -1.31
LINC00458-202ENST00000427299 CDC6Q99741 560 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 AGO3Q9H9G7 860 aaKnown RBP6.86□□□□□ -1.31
LINC00458-202ENST00000427299 PTPN23Q9H3S7 1636 aa6.86□□□□□ -1.31
LINC00458-202ENST00000427299 SNAPC4Q5SXM2 1469 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 RAB3GAP2Q9H2M9 1393 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 GSTA4O15217 222 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 ADH4P08319 380 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
LINC00458-202ENST00000427299 NAT1P18440 290 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 TGM1P22735 817 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 HHEXQ03014 270 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 RASA3Q14644 834 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 FAM47CQ5HY64 1035 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 SPTY2D1Q68D10 685 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms