RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 POTEGQ6S5H5 508 aa24.99■■□□□ 1.59
PTCD3-203ENST00000409783 CELF4Q9BZC1 486 aaKnown RBP24.99■■□□□ 1.59
PTCD3-203ENST00000409783 CDHR5Q9HBB8 845 aa24.99■■□□□ 1.59
PTCD3-203ENST00000409783 CXXC1Q9P0U4 656 aaPredicted RBP24.99■■□□□ 1.59
PTCD3-203ENST00000409783 TRPV2Q9Y5S1 764 aa24.99■■□□□ 1.59
PTCD3-203ENST00000409783 MORC2Q9Y6X9 1032 aaPredicted RBP24.99■■□□□ 1.59
PTCD3-203ENST00000409783 VTNP04004 478 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 NASPP49321 788 aaPredicted RBP24.98■■□□□ 1.59
PTCD3-203ENST00000409783 RARRES1P49788 294 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 CEBPZQ03701 1054 aaKnown RBP24.98■■□□□ 1.59
PTCD3-203ENST00000409783 LPIN1Q14693 890 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 OTOP2Q7RTS6 562 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 SNX29Q8TEQ0 813 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 NACC1Q96RE7 527 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 SUGCTQ9HAC7 445 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 STK24Q9Y6E0 443 aa24.98■■□□□ 1.59
PTCD3-203ENST00000409783 PTPRSQ13332 1948 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 GPR32O75388 356 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 TMOD1P28289 359 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 SLC39A14Q15043 492 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 LRIT3Q3SXY7 679 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 CNKSR3Q6P9H4 555 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 DBF4BQ8NFT6 615 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 RNPC3Q96LT9 517 aaKnown RBP24.97■■□□□ 1.59
PTCD3-203ENST00000409783 XPNPEP1Q9NQW7 623 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 FBXO2Q9UK22 296 aaPredicted RBP24.97■■□□□ 1.59
PTCD3-203ENST00000409783 DBR1Q9UK59 544 aaKnown RBP24.97■■□□□ 1.59
PTCD3-203ENST00000409783 SQORQ9Y6N5 450 aa24.97■■□□□ 1.59
PTCD3-203ENST00000409783 MICAL3Q7RTP6 2002 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 GHRP10912 638 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 RFC5P40937 340 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 HYIQ5T013 277 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 KRT79Q5XKE5 535 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 ADAMTS10Q9H324 1103 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 AGO3Q9H9G7 860 aaKnown RBP24.96■■□□□ 1.59
PTCD3-203ENST00000409783 LAMA3Q16787 3333 aa24.96■■□□□ 1.59
PTCD3-203ENST00000409783 MARCKSP29966 332 aaPredicted RBP24.95■■□□□ 1.58
PTCD3-203ENST00000409783 DDIT3P35638 169 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 KIZQ2M2Z5 673 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 TMEM40Q8WWA1 233 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 AK8Q96MA6 479 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 PNMA5Q96PV4 448 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 MAP7D2Q96T17 732 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 JPH2Q9BR39 696 aaPredicted RBP24.95■■□□□ 1.58
PTCD3-203ENST00000409783 TFIP11Q9UBB9 837 aaKnown RBP24.95■■□□□ 1.58
PTCD3-203ENST00000409783 KIAA1024Q9UPX6 916 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 AKT3Q9Y243 479 aa24.95■■□□□ 1.58
PTCD3-203ENST00000409783 SRPRBQ9Y5M8 271 aaKnown RBP24.95■■□□□ 1.58
PTCD3-203ENST00000409783 M0QZ92 97 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 ACTN1P12814 892 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 LONP1P36776 959 aaKnown RBP24.94■■□□□ 1.58
PTCD3-203ENST00000409783 GPC3P51654 580 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 POLGP54098 1239 aaPredicted RBP24.94■■□□□ 1.58
PTCD3-203ENST00000409783 NLRP11P59045 1033 aaKnown RBP24.94■■□□□ 1.58
PTCD3-203ENST00000409783 EMC2Q15006 297 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 TSHZ1Q6ZSZ6 1077 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 EXOC8Q8IYI6 725 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 LINC00301Q8NCQ3 95 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 SLC7A3Q8WY07 619 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 ZNF396Q96N95 335 aaPredicted RBP24.94■■□□□ 1.58
PTCD3-203ENST00000409783 PPP1R16BQ96T49 567 aa24.94■■□□□ 1.58
PTCD3-203ENST00000409783 BMP2KQ9NSY1 1161 aaPredicted RBP24.94■■□□□ 1.58
PTCD3-203ENST00000409783 DDX19AQ9NUU7 478 aaKnown RBP24.94■■□□□ 1.58
PTCD3-203ENST00000409783 SOX1O00570 391 aaPredicted RBP24.93■■□□□ 1.58
PTCD3-203ENST00000409783 BAIAP3O94812 1187 aa24.93■■□□□ 1.58
PTCD3-203ENST00000409783 CRYBB1P53674 252 aaPredicted RBP24.93■■□□□ 1.58
PTCD3-203ENST00000409783 GRB10Q13322 594 aa24.93■■□□□ 1.58
PTCD3-203ENST00000409783 KCNK18Q7Z418 384 aa24.93■■□□□ 1.58
PTCD3-203ENST00000409783 SEPT8Q92599 483 aa24.93■■□□□ 1.58
PTCD3-203ENST00000409783 IFIH1Q9BYX4 1025 aaKnown RBP24.93■■□□□ 1.58
PTCD3-203ENST00000409783 SUCLA2Q9P2R7 463 aaPredicted RBP24.93■■□□□ 1.58
PTCD3-203ENST00000409783 GAS2O43903 313 aaKnown RBP24.92■■□□□ 1.58
PTCD3-203ENST00000409783 DGAT1O75907 488 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 DNM2P50570 870 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 FOXD4L6Q3SYB3 417 aaPredicted RBP24.92■■□□□ 1.58
PTCD3-203ENST00000409783 FAM109BQ6ICB4 259 aaPredicted RBP24.92■■□□□ 1.58
PTCD3-203ENST00000409783 FOXD4L3Q6VB84 417 aaPredicted RBP24.92■■□□□ 1.58
PTCD3-203ENST00000409783 ZNF710Q8N1W2 664 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 USP38Q8NB14 1042 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 TMEM143Q96AN5 459 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 OSMRQ99650 979 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 CSRNP2Q9H175 543 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 GINS2Q9Y248 185 aa24.92■■□□□ 1.58
PTCD3-203ENST00000409783 ABHD14A-ACY1A0A1B0GW23 586 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 E9PMD0 336 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 CD52P31358 61 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 TMEM119Q4V9L6 283 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 USP49Q70CQ1 688 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 CABP7Q86V35 215 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 ZNF668Q96K58 619 aaPredicted RBP24.91■■□□□ 1.58
PTCD3-203ENST00000409783 CLIC6Q96NY7 704 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 MTRQ99707 1265 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 MTIF3Q9H2K0 278 aaKnown RBP24.91■■□□□ 1.58
PTCD3-203ENST00000409783 PADI3Q9ULW8 664 aa24.91■■□□□ 1.58
PTCD3-203ENST00000409783 NOC2LQ9Y3T9 749 aaKnown RBP24.91■■□□□ 1.58
PTCD3-203ENST00000409783 LAMA2P24043 3122 aaKnown RBP24.9■■□□□ 1.58
PTCD3-203ENST00000409783 GBF1Q92538 1859 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 SLC26A4O43511 780 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 YEATS4O95619 227 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 EYA4O95677 639 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms