RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ORC2Q13416 577 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 SLC18A3Q16572 532 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ALS2CLQ60I27 953 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CYP2W1Q8TAV3 490 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CABS1Q96KC9 395 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TUBB1Q9H4B7 451 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 FAM114A2Q9NRY5 505 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 FAM198AQ9UFP1 575 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 GAKO14976 1311 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MYZAPP0CAP1 466 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 NPR1P16066 1061 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 NR1D1P20393 614 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 SMARCA1P28370 1054 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 BIRC3Q13489 604 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MTMR3Q13615 1198 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CAPN12Q6ZSI9 719 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 AENQ8WTP8 325 aaKnown RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TLR10Q9BXR5 811 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 RNF14Q9UBS8 474 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CCPG1Q9ULG6 757 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 GSTTP1A0A1W2PQM5 241 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ZBED4O75132 1171 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 USP11P51784 963 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 LMBRD2Q68DH5 695 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 EMBQ6PCB8 327 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ARHGEF19Q8IW93 802 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 UBR1Q8IWV7 1749 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TMEM51Q9NW97 253 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 AJAP1Q9UKB5 411 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TISP43B9A030 160 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PPP4R3AQ6IN85 833 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PADI6Q6TGC4 694 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PROM2Q8N271 834 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 METTL13Q8N6R0 699 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 TAAR1Q96RJ0 339 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PRR12Q9ULL5 1215 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ATP6V1E1P36543 226 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ERVK-9P63128 1117 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 TRAF1Q13077 416 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 GLE1Q53GS7 698 aaKnown RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ZNF473Q8WTR7 871 aaKnown RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ARHGEF26Q96DR7 871 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 FAM84AQ96KN4 292 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 TTI1O43156 1089 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ITGA4P13612 1032 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 JAG1P78504 1218 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 CDK17Q00537 523 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 MKRN4PQ13434 485 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 AADACL2Q6P093 401 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 HHIPL2Q6UWX4 724 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PRMT6Q96LA8 375 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 FAM20AQ96MK3 541 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 AGPAT1Q99943 283 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 UBXN6Q9BZV1 441 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 SEPT10Q9P0V9 454 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 MTRF1LQ9UGC7 380 aaKnown RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PTPN22Q9Y2R2 807 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 CALCAP01258 141 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PON1P27169 355 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 IFNAR2P48551 515 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 NT5C2P49902 561 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 TTYH3Q9C0H2 523 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PLCB1Q9NQ66 1216 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 DAAM1Q9Y4D1 1078 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 KIF20BQ96Q89 1820 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ATMINO43313 823 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 SGPL1O95470 568 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 SSTR3P32745 418 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 PEX3P56589 373 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 IFT88Q13099 833 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 CALCOCO2Q13137 446 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 EPC2Q52LR7 807 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 CC2D2BQ6DHV5 1058 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 RUFY4Q6ZNE9 571 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 FRMD5Q7Z6J6 570 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 SLC35G2Q8TBE7 412 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 MAGOHBQ96A72 148 aaKnown RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ZNF653Q96CK0 615 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ATP6V1G3Q96LB4 118 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 AGBL1Q96MI9 1066 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 GDF3Q9NR23 364 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 TRPC5Q9UL62 973 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 NOC2LQ9Y3T9 749 aaKnown RBP5.34□□□□□ -1.55
SMAD4-202ENST00000398417 GJA3Q9Y6H8 435 aa5.34□□□□□ -1.55
SMAD4-202ENST00000398417 ABCC6O95255 1503 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 FAM86B1E9PN63 330 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 AGPSO00116 658 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 LZTS3O60299 673 aaPredicted RBP5.34□□□□□ -1.56
SMAD4-202ENST00000398417 AKAP3O75969 853 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 FAM86B2P0C5J1 330 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 SOX5P35711 763 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 MFAP3P55082 362 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 C15orf52Q6ZUT6 534 aaKnown RBP5.34□□□□□ -1.56
SMAD4-202ENST00000398417 LDHDQ86WU2 507 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 COL23A1Q86Y22 540 aaPredicted RBP5.34□□□□□ -1.56
SMAD4-202ENST00000398417 SYT2Q8N9I0 419 aaPredicted RBP5.34□□□□□ -1.56
SMAD4-202ENST00000398417 GANQ9H2C0 597 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 ASIC3Q9UHC3 531 aa5.34□□□□□ -1.56
SMAD4-202ENST00000398417 MTUS1Q9ULD2 1270 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms