RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 MAFO75444 373 aaPredicted RBP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 CHRNA1P02708 482 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 XRCC6P12956 609 aaKnown RBP eCLIP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 NUCB2P80303 420 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 ECM1Q16610 540 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 CEP89Q96ST8 783 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 PLIN2Q99541 437 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 FBXO2Q9UK22 296 aaPredicted RBP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 SRPRBQ9Y5M8 271 aaKnown RBP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 TRPV2Q9Y5S1 764 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 KDM3AQ9Y4C1 1321 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 SPTLC2O15270 562 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 NBNO60934 754 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 RARRES1P49788 294 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 FAM26DQ5JW98 314 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 ATL3Q6DD88 541 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 PSRC1Q6PGN9 363 aaPredicted RBP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 KRI1Q8N9T8 703 aaKnown RBP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 LINC00301Q8NCQ3 95 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 MMTAG2Q9BU76 263 aaKnown RBP32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 CSRNP2Q9H175 543 aa32.77■■■□□ 2.84
CHCHD4-202ENST00000396914 ARHGEF35A5YM69 484 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 FGBP02675 491 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 PFKMP08237 780 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 MBTPS1Q14703 1052 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 SPECC1Q5M775 1068 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 ZNF365Q70YC5 407 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 SCLT1Q96NL6 688 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 CLIC6Q96NY7 704 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 CELF4Q9BZC1 486 aaKnown RBP32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 DNM3Q9UQ16 869 aa32.76■■■□□ 2.83
CHCHD4-202ENST00000396914 YEATS4O95619 227 aa32.75■■■□□ 2.83
CHCHD4-202ENST00000396914 EMC2Q15006 297 aa32.75■■■□□ 2.83
CHCHD4-202ENST00000396914 SHHQ15465 462 aa32.75■■■□□ 2.83
CHCHD4-202ENST00000396914 C16orf59Q7L2K0 433 aa32.75■■■□□ 2.83
CHCHD4-202ENST00000396914 CALML4Q96GE6 196 aa32.75■■■□□ 2.83
CHCHD4-202ENST00000396914 DBR1Q9UK59 544 aaKnown RBP32.75■■■□□ 2.83
CHCHD4-202ENST00000396914 ACTN1P12814 892 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 MGAT3Q09327 533 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 DRP2Q13474 957 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 KIZQ2M2Z5 673 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 TMEM240Q5SV17 173 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 C9orf50Q5SZB4 431 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 OTOP2Q7RTS6 562 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 TDHQ8IZJ6 230 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 MTRQ99707 1265 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 NT5C3AQ9H0P0 336 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 DHX33Q9H6R0 707 aaKnown RBP32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 SUCLA2Q9P2R7 463 aaPredicted RBP32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 ARID2Q68CP9 1835 aa32.74■■■□□ 2.83
CHCHD4-202ENST00000396914 USO1O60763 962 aaKnown RBP32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 GHRP10912 638 aa32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 LINC01465Q8N7H1 131 aa32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 TMEM143Q96AN5 459 aa32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 ZNF668Q96K58 619 aaPredicted RBP32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 BHMT2Q9H2M3 363 aa32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 ATP6V0A4Q9HBG4 840 aa32.73■■■□□ 2.83
CHCHD4-202ENST00000396914 IGKV6-21A0A0C4DH24 114 aa32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 E9PMD0 336 aa32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 RBAK-RBAKDNI3L0D1 243 aa32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 DGAT1O75907 488 aa32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 NLRP11P59045 1033 aaKnown RBP32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 GPNMBQ14956 572 aa32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 RNPC3Q96LT9 517 aaKnown RBP32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 PRO3102Q9H379 93 aa32.72■■■□□ 2.83
CHCHD4-202ENST00000396914 ZBBXA8MT70 800 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 PPP6R2O75170 966 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 TXLNAP40222 546 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 KRT85P78386 507 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 MKRN4PQ13434 485 aaPredicted RBP32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 MAEAQ7L5Y9 396 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 RHPN2Q8IUC4 686 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 KCNG4Q8TDN1 519 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 TCP11Q8WWU5 503 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 NLRP7Q8WX94 980 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 EPSTI1Q96J88 318 aa32.71■■■□□ 2.83
CHCHD4-202ENST00000396914 ME1P48163 572 aa32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 GRB10Q13322 594 aa32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 PADI6Q6TGC4 694 aa32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 PNMA5Q96PV4 448 aa32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 OSMRQ99650 979 aa32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 OSBPL7Q9BZF2 842 aa32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 MTIF3Q9H2K0 278 aaKnown RBP32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 MORC2Q9Y6X9 1032 aaPredicted RBP32.7■■■□□ 2.83
CHCHD4-202ENST00000396914 GAS2O43903 313 aaKnown RBP32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 CXCL10P02778 98 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 SSBP05455 408 aaKnown RBP eCLIP32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 DDIT3P35638 169 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 LPIN1Q14693 890 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 KARSQ15046 597 aaKnown RBP32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 FBXO47Q5MNV8 452 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 PSPC1Q8WXF1 523 aaKnown RBP32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 SEPT8Q92599 483 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 SYMPKQ92797 1274 aaKnown RBP32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 VWCEQ96DN2 955 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 CHAMP1Q96JM3 812 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 CDHR5Q9HBB8 845 aa32.69■■■□□ 2.82
CHCHD4-202ENST00000396914 EYA4O95677 639 aa32.68■■■□□ 2.82
CHCHD4-202ENST00000396914 CRYBB1P53674 252 aaPredicted RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms