RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TTC25Q96NG3 672 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 INTUQ9ULD6 942 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 FAM170AA1A519 330 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 SP8Q8IXZ3 490 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 DDX47Q9H0S4 455 aaKnown RBP21.15■□□□□ 0.98
SHANK1-203ENST00000391813 SH3GLB2Q9NR46 395 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 MINPP1Q9UNW1 487 aa21.15■□□□□ 0.98
SHANK1-203ENST00000391813 GOLGA8HP0CJ92 632 aa21.14■□□□□ 0.98
SHANK1-203ENST00000391813 AP2B1P63010 937 aa21.14■□□□□ 0.98
SHANK1-203ENST00000391813 MDM2Q00987 491 aaPredicted RBP21.14■□□□□ 0.98
SHANK1-203ENST00000391813 ASPRV1Q53RT3 343 aa21.14■□□□□ 0.98
SHANK1-203ENST00000391813 WDR93Q6P2C0 686 aa21.14■□□□□ 0.98
SHANK1-203ENST00000391813 CYTH2Q99418 400 aa21.14■□□□□ 0.98
SHANK1-203ENST00000391813 AGTP01019 485 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 ACTN1P12814 892 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 ALAS1P13196 640 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 CUL3Q13618 768 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 NR1I3Q14994 352 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 AGBL2Q5U5Z8 902 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 APLFQ8IW19 511 aaPredicted RBP21.14■□□□□ 0.97
SHANK1-203ENST00000391813 WDR75Q8IWA0 830 aaKnown RBP21.14■□□□□ 0.97
SHANK1-203ENST00000391813 TGS1Q96RS0 853 aaKnown RBP21.14■□□□□ 0.97
SHANK1-203ENST00000391813 NOC2LQ9Y3T9 749 aaKnown RBP21.14■□□□□ 0.97
SHANK1-203ENST00000391813 A0A0G2JND7 137 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 H7C0C1 242 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 ATP5OP48047 213 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 SRRM1Q8IYB3 904 aaKnown RBP21.14■□□□□ 0.97
SHANK1-203ENST00000391813 DYDC2Q96IM9 177 aa21.14■□□□□ 0.97
SHANK1-203ENST00000391813 CPS1P31327 1500 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 DIAPH2O60879 1101 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 LRRN2O75325 713 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 PRR29P0C7W0 189 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 POLR2MP0CAP2 368 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 MORC4Q8TE76 937 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 MID2Q9UJV3 735 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 TRIM49BA6NDI0 452 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 MRPS35P82673 323 aaKnown RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 DHX34Q14147 1143 aaKnown RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 FAM83BQ5T0W9 1011 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 CRLF3Q8IUI8 442 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 SH2D3CQ8N5H7 860 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 IRAK4Q9NWZ3 460 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 ADD3Q9UEY8 706 aaKnown RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 KRT26Q7Z3Y9 468 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 MAML1Q92585 1016 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 GFPT1Q06210 699 aaPredicted RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 NKX1-1Q15270 411 aaPredicted RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 PDZD4Q76G19 769 aaPredicted RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 MB21D2Q8IYB1 491 aaPredicted RBP21.13■□□□□ 0.97
SHANK1-203ENST00000391813 PYROXD1Q8WU10 500 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 NDE1Q9NXR1 346 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 L1RE1Q9UN81 338 aa21.13■□□□□ 0.97
SHANK1-203ENST00000391813 TTLL1O95922 423 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 AGGF1Q8N302 714 aaeCLIP21.12■□□□□ 0.97
SHANK1-203ENST00000391813 STAG2Q8N3U4 1231 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 RIN2Q8WYP3 895 aaPredicted RBP21.12■□□□□ 0.97
SHANK1-203ENST00000391813 SLC40A1Q9NP59 571 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 PPARGC1AQ9UBK2 798 aaKnown RBP21.12■□□□□ 0.97
SHANK1-203ENST00000391813 PLS3P13797 630 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 TTBK2Q6IQ55 1244 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 SPATA21Q7Z572 469 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 SEC16BQ96JE7 1060 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 MOV10L1Q9BXT6 1211 aaKnown RBP21.12■□□□□ 0.97
SHANK1-203ENST00000391813 FER1L4A9Z1Z3 1794 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 WDR91A4D1P6 747 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 KRT37O76014 449 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 LRRC31Q6UY01 552 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 SCYL1Q96KG9 808 aa21.12■□□□□ 0.97
SHANK1-203ENST00000391813 M0QZ92 97 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 KCTD2Q14681 263 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 RAD9BQ6WBX8 426 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 REXO1L1PQ8IX06 675 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 CYFIP2Q96F07 1278 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 LRRIQ1Q96JM4 1722 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 NCK2O43639 380 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 LIG4P49917 911 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 RASGRF1Q13972 1273 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 MMGT1Q8N4V1 131 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 TMEM206Q9H813 350 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 CD209Q9NNX6 404 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 AFG3L2Q9Y4W6 797 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 NRKQ7Z2Y5 1582 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 USP42Q9H9J4 1324 aaKnown RBP21.11■□□□□ 0.97
SHANK1-203ENST00000391813 DLATP10515 647 aaKnown RBP21.11■□□□□ 0.97
SHANK1-203ENST00000391813 HSPA9P38646 679 aaKnown RBP21.11■□□□□ 0.97
SHANK1-203ENST00000391813 CYP4A11Q02928 519 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 ANO5Q75V66 913 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 LRRC47Q8N1G4 583 aaKnown RBP21.11■□□□□ 0.97
SHANK1-203ENST00000391813 SYNE4Q8N205 404 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 MYO3AQ8NEV4 1616 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 AMNQ9BXJ7 453 aa21.11■□□□□ 0.97
SHANK1-203ENST00000391813 MCF2LO15068 1137 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 KCNB1Q14721 858 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 RNF34Q969K3 372 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 GRIN3BO60391 1043 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 CPP00450 1065 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 STX1BP61266 288 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 C1orf146Q5VVC0 180 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms