RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SKOR1P84550 965 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
BEST1-201ENST00000378043 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
BEST1-201ENST00000378043 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 LNX1Q8TBB1 728 aaPredicted RBP11.93□□□□□ -0.5
BEST1-201ENST00000378043 TAF4BQ92750 862 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 TSPYL1Q9H0U9 437 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 RASSF4Q9H2L5 321 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
BEST1-201ENST00000378043 CHMP2AO43633 222 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 CEP104O60308 925 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 GFPT2O94808 682 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 GAP43P17677 238 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 ANXA13P27216 316 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 TNNC1P63316 161 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 MYCT1Q8N699 235 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 ACER1Q8TDN7 264 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 PBKQ96KB5 322 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 RUFY1Q96T51 708 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 AP1M1Q9BXS5 423 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 TMX4Q9H1E5 349 aaPredicted RBP11.93□□□□□ -0.5
BEST1-201ENST00000378043 RABEP2Q9H5N1 569 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 TUFT1Q9NNX1 390 aa11.93□□□□□ -0.5
BEST1-201ENST00000378043 ATP8B3O60423 1300 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 EVI5O60447 810 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CLSTN1O94985 981 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CFBP00751 764 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 H2AFZP0C0S5 128 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CORO7P57737 925 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 GNGT1P63211 74 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 UBXN2AP68543 259 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 PPP2R5CQ13362 524 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 NFIL3Q16649 462 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 LRCH2Q5VUJ6 765 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 H2AFVQ71UI9 128 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 FAM186BQ8IYM0 893 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 SLC5A5Q92911 643 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CSRNP1Q96S65 589 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 SYT11Q9BT88 431 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 GPR88Q9GZN0 384 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 ISCUQ9H1K1 167 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 TAF1DQ9H5J8 278 aaPredicted RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 A0A0A6YYK5 440 aaPredicted RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 F8VZ95 297 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 SART1O43290 800 aaKnown RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 ENTPD3O75355 529 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 FAM13AO94988 1023 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 ITGA4P13612 1032 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 PSMC2P35998 433 aaKnown RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 STAT2P52630 851 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 ZNF131P52739 623 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 GALCP54803 685 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CBWD6Q4V339 395 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CBWD3Q5JTY5 395 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 CBWD5Q5RIA9 395 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 ZNF720Q7Z2F6 126 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 NT5DC3Q86UY8 548 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 DDX42Q86XP3 938 aaKnown RBP eCLIP11.92□□□□□ -0.5
BEST1-201ENST00000378043 CD302Q8IX05 232 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 PARVGQ9HBI0 331 aa11.92□□□□□ -0.5
BEST1-201ENST00000378043 NOC2LQ9Y3T9 749 aaKnown RBP11.92□□□□□ -0.5
BEST1-201ENST00000378043 SHTN1A0MZ66 631 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 HSPA9P38646 679 aaKnown RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 CCT5P48643 541 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 FMO5P49326 533 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.91□□□□□ -0.5
BEST1-201ENST00000378043 DDX47Q9H0S4 455 aaKnown RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 NEUROG2Q9H2A3 272 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 OSGEPQ9NPF4 335 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 DMAC2Q9NW81 257 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 INTUQ9ULD6 942 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 FERP16591 822 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 SOX5P35711 763 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 PDCLQ13371 301 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 AOC3Q16853 763 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 EMC10Q5UCC4 262 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 MSL1Q68DK7 614 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 PEX26Q7Z412 305 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 GLYCTKQ8IVS8 523 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 RASGEF1CQ8N431 466 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 HES6Q96HZ4 224 aa11.91□□□□□ -0.5
BEST1-201ENST00000378043 CALR3Q96L12 384 aaKnown RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 SUCLA2Q9P2R7 463 aaPredicted RBP11.91□□□□□ -0.5
BEST1-201ENST00000378043 IGSF9BQ9UPX0 1349 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 TRIM49P0CI25 452 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 TRIM49CP0CI26 452 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 ARP10275 920 aa11.9□□□□□ -0.5
BEST1-201ENST00000378043 STAT1P42224 750 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms