RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 DGAT1O75907 488 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 GH1P01241 217 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 LAMC2Q13753 1193 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 MTERF2Q49AM1 385 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 EMID1Q96A84 441 aaPredicted RBP25.6■■□□□ 1.69
SDF4-202ENST00000360001 CTAGE1Q96RT6 745 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 LARSQ9P2J5 1176 aaKnown RBP25.6■■□□□ 1.69
SDF4-202ENST00000360001 PLS3P13797 630 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 RGS2P41220 211 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 NR1I3Q14994 352 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 KNOP1Q1ED39 458 aaKnown RBP25.59■■□□□ 1.69
SDF4-202ENST00000360001 LRRC55Q6ZSA7 311 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 TRIM50Q86XT4 487 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 REM2Q8IYK8 340 aaPredicted RBP25.59■■□□□ 1.69
SDF4-202ENST00000360001 CEP89Q96ST8 783 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 NRBP1Q9UHY1 535 aa25.59■■□□□ 1.69
SDF4-202ENST00000360001 ZHX1Q9UKY1 873 aaPredicted RBP25.59■■□□□ 1.69
SDF4-202ENST00000360001 CYP2B6P20813 491 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 EEF1GP26641 437 aaKnown RBP25.58■■□□□ 1.69
SDF4-202ENST00000360001 CCL14Q16627 93 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 ZC2HC1CQ53FD0 456 aaPredicted RBP25.58■■□□□ 1.69
SDF4-202ENST00000360001 HS1BP3Q53T59 392 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 FAM102BQ5T8I3 360 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 PLPPR4Q7Z2D5 763 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 STRA6Q9BX79 667 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 XPNPEP1Q9NQW7 623 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 ZSWIM8A7E2V4 1837 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 MAPTP10636 758 aaKnown RBP25.58■■□□□ 1.69
SDF4-202ENST00000360001 SMPD1P17405 629 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 KCNA1Q09470 495 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 GLG1Q92896 1179 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 APBA2Q99767 749 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 NRBP2Q9NSY0 501 aa25.58■■□□□ 1.69
SDF4-202ENST00000360001 GOLGA6L6A8MZA4 724 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 PPP1R37O75864 691 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 IGHA2P01877 340 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 TPM3P06753 285 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 TARBP2Q15633 366 aaKnown RBP25.57■■□□□ 1.68
SDF4-202ENST00000360001 CCDC144BQ3MJ40 725 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 DUSP28Q4G0W2 176 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 OLFML2BQ68BL8 750 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 IQSEC1Q6DN90 963 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 MCPH1Q8NEM0 835 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 ATP6V0A4Q9HBG4 840 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 UBE4BO95155 1302 aa25.57■■□□□ 1.68
SDF4-202ENST00000360001 COPB1P53618 953 aaKnown RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 SOX10P56693 466 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 IRF5Q13568 498 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 PPP4R3CPQ6ZMV5 832 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 FAM114A1Q8IWE2 563 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 ANKRD20A12PQ8NF67 263 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 PPTC7Q8NI37 304 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 FAM167AQ96KS9 214 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 CNOT6LQ96LI5 555 aaKnown RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 ARHGAP39Q9C0H5 1083 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 TAB2Q9NYJ8 693 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 MAGEC2Q9UBF1 373 aaPredicted RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 TRAF3IP3Q9Y228 551 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 ZMYM2Q9UBW7 1377 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 LACTBP83111 547 aaPredicted RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 FKBP3Q00688 224 aaKnown RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 EDRF1Q3B7T1 1238 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 PRAMEF19Q5SWL8 479 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 STXBP4Q6ZWJ1 553 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 CREBRFQ8IUR6 639 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 ZC3H3Q8IXZ2 948 aaKnown RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 KIFAP3Q92845 792 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 DHX33Q9H6R0 707 aaKnown RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 RTN4Q9NQC3 1192 aaKnown RBP25.56■■□□□ 1.68
SDF4-202ENST00000360001 PCDHB13Q9Y5F0 798 aa25.56■■□□□ 1.68
SDF4-202ENST00000360001 PDXKO00764 312 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 TEX33O43247 280 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 ADCY6O43306 1168 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 FGFR1OPO95684 399 aaKnown RBP25.55■■□□□ 1.68
SDF4-202ENST00000360001 FCGRTP55899 365 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 VSTM4Q8IW00 320 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 AFG1LQ8WV93 481 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 SMARCAD1Q9H4L7 1026 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 K7ENM7 598 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 MARK3P27448 753 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 CYP2C19P33261 490 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 PSMC4P43686 418 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 SLC26A2P50443 739 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 POLGP54098 1239 aaPredicted RBP25.55■■□□□ 1.68
SDF4-202ENST00000360001 PEX3P56589 373 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 EMC2Q15006 297 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 PTPN21Q16825 1174 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 FILIP1LQ4L180 1135 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 CCDC186Q7Z3E2 898 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 TMC6Q7Z403 805 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 KSR1Q8IVT5 923 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 ATP8B4Q8TF62 1192 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 BBXQ8WY36 941 aaPredicted RBP25.55■■□□□ 1.68
SDF4-202ENST00000360001 VPS16Q9H269 839 aa25.55■■□□□ 1.68
SDF4-202ENST00000360001 TYW1Q9NV66 732 aaKnown RBP25.55■■□□□ 1.68
SDF4-202ENST00000360001 NKRFO15226 690 aaKnown RBP eCLIP25.54■■□□□ 1.682e-6■■■□□ 17
SDF4-202ENST00000360001 ZNF865P0CJ78 1059 aaPredicted RBP25.54■■□□□ 1.68
SDF4-202ENST00000360001 PLCB4Q15147 1175 aa25.54■■□□□ 1.68
SDF4-202ENST00000360001 BSNDQ8WZ55 320 aa25.54■■□□□ 1.68
SDF4-202ENST00000360001 CEP63Q96MT8 703 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms