RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 CBX8Q9HC52 389 aa16.92■□□□□ 0.3
PCNX3-201ENST00000355703 PSMC2P35998 433 aaKnown RBP16.92■□□□□ 0.3
PCNX3-201ENST00000355703 PRAMEP78395 509 aa16.92■□□□□ 0.3
PCNX3-201ENST00000355703 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
PCNX3-201ENST00000355703 SEPT5Q99719 369 aaPredicted RBP16.92■□□□□ 0.3
PCNX3-201ENST00000355703 TJP2Q9UDY2 1190 aa16.92■□□□□ 0.3
PCNX3-201ENST00000355703 SLC25A13Q9UJS0 675 aa16.92■□□□□ 0.3
PCNX3-201ENST00000355703 FBXL21Q9UKT6 434 aa16.92■□□□□ 0.3
PCNX3-201ENST00000355703 NOS1P29475 1434 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 WDR75Q8IWA0 830 aaKnown RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 OGFRQ9NZT2 677 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 CTSWP56202 376 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 ZNF280CQ8ND82 737 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 IPCEF1Q8WWN9 437 aaPredicted RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 CLIC6Q96NY7 704 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 COPG1Q9Y678 874 aaKnown RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 RASSF10A6NK89 507 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 ERICH1Q86X53 443 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 NUP93Q8N1F7 819 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 TEX28O15482 410 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 CYTH3O43739 400 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 PYROXD1Q8WU10 500 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 OTUD5Q96G74 571 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 SERPINI1Q99574 410 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 EIF3CQ99613 913 aaKnown RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 TADA2AO75478 443 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 MZF1P28698 734 aaPredicted RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 INPP5DQ92835 1189 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 CAPS2Q9BXY5 557 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 RAD51Q06609 339 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 C2orf54Q08AI8 447 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 INAQ16352 499 aa16.91■□□□□ 0.3
PCNX3-201ENST00000355703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.91■□□□□ 0.3
PCNX3-201ENST00000355703 TNRQ92752 1358 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
PCNX3-201ENST00000355703 NR2F2P24468 414 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
PCNX3-201ENST00000355703 IFT88Q13099 833 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 NR5A1Q13285 461 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 GCKRQ14397 625 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 SRRM1Q8IYB3 904 aaKnown RBP16.9■□□□□ 0.3
PCNX3-201ENST00000355703 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 KLHL18O94889 574 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 SUN1O94901 812 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 ATP1A1P05023 1023 aaKnown RBP16.9■□□□□ 0.3
PCNX3-201ENST00000355703 SNCBQ16143 134 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 FAM133AQ8N9E0 248 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 MTBPQ96DY7 904 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
PCNX3-201ENST00000355703 MMP19Q99542 508 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 A0A0G2JND7 137 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
PCNX3-201ENST00000355703 LRRC8EQ6NSJ5 796 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 CAMKK1Q8N5S9 505 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 TRIM58Q8NG06 486 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 ZNF229Q9UJW7 825 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 FAM47E-STBD1D6RA91 191 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 EFTUD2Q15029 972 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 26.9
PCNX3-201ENST00000355703 PNKPQ96T60 521 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 BBS2Q9BXC9 721 aa16.9■□□□□ 0.3
PCNX3-201ENST00000355703 PEX3P56589 373 aa16.89■□□□□ 0.3
PCNX3-201ENST00000355703 EXOC1LA0A1B0GW35 172 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ZNF197O14709 1029 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 SPAG7O75391 227 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 MAP2K2P36507 400 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ERFP50548 548 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 SUPT3HO75486 399 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ZNF235Q14590 738 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 KRT39Q6A163 491 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 SPATS2Q86XZ4 545 aaKnown RBP16.89■□□□□ 0.29
PCNX3-201ENST00000355703 DEPDC7Q96QD5 511 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 TCEA2Q15560 299 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 MRFAP1L1Q96HT8 127 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 PLEKHA8Q96JA3 519 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ADNPQ9H2P0 1102 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 K7ERI5 159 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 FLAD1Q8NFF5 587 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ERO1AQ96HE7 468 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 NFKBIZQ9BYH8 718 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 REXO4Q9GZR2 422 aaKnown RBP16.89■□□□□ 0.29
PCNX3-201ENST00000355703 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 PRG3Q9Y2Y8 225 aaPredicted RBP16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ABCC4O15439 1325 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 IKBKBO14920 756 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ESRRAP11474 423 aaPredicted RBP16.89■□□□□ 0.29
PCNX3-201ENST00000355703 IGFBP4P22692 258 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
PCNX3-201ENST00000355703 AP1M1Q9BXS5 423 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms