RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 KRT76Q01546 638 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 MAN2A1Q16706 1144 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FAM153CQ494X1 144 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 WLSQ5T9L3 541 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 GALNT17Q6IS24 598 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FOXR2Q6PJQ5 311 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC84Q86UT8 332 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-202ENST00000354421 TAX1BP1Q86VP1 789 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 C2CD5Q86YS7 1000 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF34Q8IZ26 560 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 ARFGAP2Q8N6H7 521 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 LRRC15Q8TF66 581 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 ZKSCAN4Q969J2 545 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-202ENST00000354421 AK8Q96MA6 479 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 TMBIM4Q9HC24 238 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 SMARCAL1Q9NZC9 954 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FAM153AQ9UHL3 310 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FAM205AQ6ZU69 1335 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 WTIPA6NIX2 430 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 PP2D1A8MPX8 630 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 SMIM22K7EJ46 135 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 NCK2O43639 380 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 AKR1B10O60218 316 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 HEXIM1O94992 359 aaKnown RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 MATR3P43243 847 aaKnown RBP eCLIP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 PDE4DQ08499 809 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 ITGB3BPQ13352 177 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CDC37Q16543 378 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 ADGRA1Q86SQ6 560 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC50Q8IVM0 306 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 SDR42E1Q8WUS8 393 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CASKIN2Q8WXE0 1202 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 SYN2Q92777 582 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 MTMR8Q96EF0 704 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 HINFPQ9BQA5 517 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 HTATIP2Q9BUP3 242 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 TRIM9Q9C026 710 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 TMEM60Q9H2L4 133 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 NDST4Q9H3R1 872 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 SEMA6BQ9H3T3 888 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF408Q9H9D4 720 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 EPB41L5Q9HCM4 733 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 KLC4Q9NSK0 619 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 EHD2Q9NZN4 543 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 SALL4Q9UJQ4 1053 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 NFU1Q9UMS0 254 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CEP83Q9Y592 693 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 HTTP42858 3142 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF804BA4D1E1 1349 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC194A0A1B0GVG4 234 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 C5orf60A6NFR6 353 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 EPHB6O15197 1021 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 KRT14P02533 472 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 KIF5BP33176 963 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 NT5C2P49902 561 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 MRPS25P82663 173 aaKnown RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 HDLBPQ00341 1268 aaKnown RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 AMPD3Q01432 767 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 GUCY1A3Q02108 690 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 GUCY2DQ02846 1103 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 PTSQ03393 145 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 STK4Q13043 487 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 NEDD9Q14511 834 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 LACTB2Q53H82 288 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 AGBL2Q5U5Z8 902 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 KCTD16Q68DU8 428 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CNNM4Q6P4Q7 775 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CABP7Q86V35 215 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC13Q8IYE1 715 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 RASSF8Q8NHQ8 419 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 ANKS1AQ92625 1134 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 P3H4Q92791 437 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 INPP4AQ96PE3 977 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
C11orf54-202ENST00000354421 SLC40A1Q9NP59 571 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 PCDHA6Q9UN73 950 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 TRIM17Q9Y577 477 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 PCDHA8Q9Y5H6 950 aa8.23□□□□□ -1.09
C11orf54-202ENST00000354421 CACNA1SQ13698 1873 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 NUP98P52948 1817 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 PVALEFA0A1B0GWK0 134 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 LRRC53A6NM62 1247 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 BTNL10A8MVZ5 291 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 PAEPP09466 180 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
C11orf54-202ENST00000354421 PLCG1P19174 1290 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 CXCR5P32302 372 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 RDXP35241 583 aaKnown RBP8.22□□□□□ -1.09
C11orf54-202ENST00000354421 GNAQP50148 359 aa8.22□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF157P51786 506 aaPredicted RBP8.22□□□□□ -1.09
C11orf54-202ENST00000354421 TNNC1P63316 161 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms