RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MCM8Q9UJA3 840 aa20.52■□□□□ 0.87
PSPC1-201ENST00000338910 KDM3AQ9Y4C1 1321 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 NPHP3-ACAD11A0A0J9YXS1 232 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 PHF20L1A8MW92 1017 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 ASNSP08243 561 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 PLA2G4BP0C869 781 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 ZNF76P36508 570 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
PSPC1-201ENST00000338910 TNFAIP1Q13829 316 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 NEDD9Q14511 834 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 COBLL1Q53SF7 1204 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 IFT81Q8WYA0 676 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 BMP2KQ9NSY1 1161 aaPredicted RBP20.51■□□□□ 0.87
PSPC1-201ENST00000338910 TBC1D7Q9P0N9 293 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 RDXP35241 583 aaKnown RBP20.51■□□□□ 0.87
PSPC1-201ENST00000338910 Q4G0T1 1027 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 ANKRD13CQ8N6S4 541 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 NOX5Q96PH1 765 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 FAM207AQ9NSI2 230 aaPredicted RBP20.51■□□□□ 0.87
PSPC1-201ENST00000338910 PANK4Q9NVE7 773 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 BCCIPQ9P287 314 aaKnown RBP eCLIP20.51■□□□□ 0.87
PSPC1-201ENST00000338910 HACL1Q9UJ83 578 aa20.51■□□□□ 0.87
PSPC1-201ENST00000338910 POTEFA5A3E0 1075 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 POTEIP0CG38 1075 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 GUCY2FP51841 1108 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 SPIRE1Q08AE8 756 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 ASTE1Q2TB18 679 aaPredicted RBP20.5■□□□□ 0.87
PSPC1-201ENST00000338910 POTEGQ6S5H5 508 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 POTEEQ6S8J3 1075 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 CATSPER3Q86XQ3 398 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 DHX37Q8IY37 1157 aaKnown RBP20.5■□□□□ 0.87
PSPC1-201ENST00000338910 GUF1Q8N442 669 aaKnown RBP20.5■□□□□ 0.87
PSPC1-201ENST00000338910 RNF10Q8N5U6 811 aaKnown RBP20.5■□□□□ 0.87
PSPC1-201ENST00000338910 WHAMMQ8TF30 809 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 CASKIN2Q8WXE0 1202 aa20.5■□□□□ 0.87
PSPC1-201ENST00000338910 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.87
PSPC1-201ENST00000338910 MEIS1O00470 390 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 EHHADHQ08426 723 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 COASYQ13057 564 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 CHURC1Q8WUH1 139 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 SLC40A1Q9NP59 571 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 LRRC53A6NM62 1247 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 E7EVH7 732 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 MSH4O15457 936 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 ERCC3P19447 782 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 VWA3BQ502W6 1294 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 WLSQ5T9L3 541 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 GPBP1Q86WP2 473 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 GIMAP7Q8NHV1 300 aa20.49■□□□□ 0.87
PSPC1-201ENST00000338910 PIK3CDO00329 1044 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 PSMC6P62333 389 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 PSMD2Q13200 908 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 CYFIP2Q96F07 1278 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 DEFB129Q9H1M3 183 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 NDST4Q9H3R1 872 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 TBX3O15119 743 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 BUB1O43683 1085 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 UBXN2AP68543 259 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 SLC30A10Q6XR72 485 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 BAP1Q92560 729 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 ZNF341Q9BYN7 854 aa20.48■□□□□ 0.87
PSPC1-201ENST00000338910 CIITAP33076 1130 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 HSPA9P38646 679 aaKnown RBP20.47■□□□□ 0.87
PSPC1-201ENST00000338910 GFPT1Q06210 699 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-201ENST00000338910 RRAGAQ7L523 313 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 FAM20AQ96MK3 541 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 FGFBP2Q9BYJ0 223 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 ZHX3Q9H4I2 956 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 TMBIM4Q9HC24 238 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 PLAAQ9Y263 795 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 CYP11B2P19099 503 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 ELF1P32519 619 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 FAM26FQ5R3K3 315 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 CEP85LQ5SZL2 805 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 MYOCDQ8IZQ8 938 aa20.47■□□□□ 0.87
PSPC1-201ENST00000338910 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
PSPC1-201ENST00000338910 ACTR5Q9H9F9 607 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-201ENST00000338910 GRID2IPA4D2P6 1211 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 GCOM1H8Y6P7 765 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-201ENST00000338910 KRT18P05783 430 aaKnown RBP20.46■□□□□ 0.87
PSPC1-201ENST00000338910 POLR2MP0CAP2 368 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 SPATA31C1P0DKV0 1188 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 CYP4A11Q02928 519 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 TRADDQ15628 312 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 HERC4Q5GLZ8 1057 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-201ENST00000338910 GPIHBP1Q8IV16 184 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 C3orf20Q8ND61 904 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 ERMNQ8TAM6 284 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 KRT12Q99456 494 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 MMRN2Q9H8L6 949 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 SSU72P8A0A1W2PR75 194 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 TRAF1Q13077 416 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 PABPC4Q13310 644 aaKnown RBP eCLIP20.46■□□□□ 0.87
PSPC1-201ENST00000338910 ARSHQ5FYA8 562 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 NBPF12Q5TAG4 269 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-201ENST00000338910 CCDC65Q8IXS2 484 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 ARFGAP2Q8N6H7 521 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms