RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RHOXF2Q9BQY4 288 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 FUT8Q9BYC5 575 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 PRDM4Q9UKN5 801 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 VAV3Q9UKW4 847 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 UBIAD1Q9Y5Z9 338 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 CA12O43570 354 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 AKR1B10O60218 316 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 TACC1O75410 805 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 PSMD10O75832 226 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 ALDH1A1P00352 501 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 ATP1A1P05023 1023 aaKnown RBP15.58■□□□□ 0.08
VRK3-201ENST00000316763 CRHR2Q13324 411 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 NCAPH2Q6IBW4 605 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 XRRA1Q6P2D8 792 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 RRAGAQ7L523 313 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 ANKRD13CQ8N6S4 541 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 GTF3C2Q8WUA4 911 aaPredicted RBP15.58■□□□□ 0.08
VRK3-201ENST00000316763 PDCD2LQ9BRP1 358 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 IFIH1Q9BYX4 1025 aaKnown RBP15.58■□□□□ 0.08
VRK3-201ENST00000316763 LACRTQ9GZZ8 138 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 ZFYVE28Q9HCC9 887 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 FBXO40Q9UH90 709 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 PCDHA13Q9Y5I0 950 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.08
VRK3-201ENST00000316763 ENC1O14682 589 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 TLR2O60603 784 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 SASH3O75995 380 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 LCA5LO95447 670 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 CYP11B2P19099 503 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 EIF4A3P38919 411 aaKnown RBP15.57■□□□□ 0.08
VRK3-201ENST00000316763 KIF11P52732 1056 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 CYP27A1Q02318 531 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 SMC1AQ14683 1233 aaKnown RBP15.57■□□□□ 0.08
VRK3-201ENST00000316763 IQCEQ6IPM2 695 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 PDXDC1Q6P996 788 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.57■□□□□ 0.08
VRK3-201ENST00000316763 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 UIMC1Q96RL1 719 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 UBXN6Q9BZV1 441 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 R3HDMLQ9H3Y0 253 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 ARHGAP20Q9P2F6 1191 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 CPA4Q9UI42 421 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 FAM184BQ9ULE4 1060 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 DNM3Q9UQ16 869 aa15.57■□□□□ 0.08
VRK3-201ENST00000316763 RCCD1A6NED2 376 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 LRRC53A6NM62 1247 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 NKRFO15226 690 aaKnown RBP eCLIP15.56■□□□□ 0.08
VRK3-201ENST00000316763 MED24O75448 989 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 ARP10275 920 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 EIF2AK2P19525 551 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 MARSP56192 900 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 ERVK-9P63128 1117 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 PPP2R5CQ13362 524 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 ARHGEF16Q5VV41 709 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 NSUN6Q8TEA1 469 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 PNKPQ96T60 521 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 MOV10L1Q9BXT6 1211 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 JADE2Q9NQC1 790 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 ST7Q9NRC1 585 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 CEP72Q9P209 647 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 MACROD2A1Z1Q3 448 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 MAP2K7O14733 419 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 TRPA1O75762 1119 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 EIF3JO75822 258 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 SLC25A27O95847 323 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 RPA1P27694 616 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 SLC12A3P55017 1021 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 EDRF1Q3B7T1 1238 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 BEND6Q5SZJ8 279 aaPredicted RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 C17orf99Q6UX52 265 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 OTOP1Q7RTM1 612 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 VSIG10LQ86VR7 867 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 MSL3Q8N5Y2 521 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 GPRC5AQ8NFJ5 357 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 CAGE1Q8TC20 777 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 BAP1Q92560 729 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 SYN2Q92777 582 aaPredicted RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 ALS2CR12Q96Q35 445 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 LUC7LQ9NQ29 371 aaKnown RBP15.56■□□□□ 0.08
VRK3-201ENST00000316763 KCNH7Q9NS40 1196 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 HDAC6Q9UBN7 1215 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 MORF4L1Q9UBU8 362 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 TFR2Q9UP52 801 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.56■□□□□ 0.08
VRK3-201ENST00000316763 PFASO15067 1338 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 PCNTO95613 3336 aa15.56■□□□□ 0.08
VRK3-201ENST00000316763 SSU72P8A0A1W2PR75 194 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 IPO5O00410 1097 aaKnown RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 CETN3O15182 167 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 EPHB6O15197 1021 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 PLEKP08567 350 aaPredicted RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 COPB2P35606 906 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 LRCH2Q5VUJ6 765 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms