RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ASXL2Q76L83 1435 aa8.78□□□□□ -1
APOB-201ENST00000233242 DDX39AO00148 427 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 EIF6P56537 245 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 THOC5Q13769 683 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 RABGAP1LQ5R372 815 aa8.78□□□□□ -1
APOB-201ENST00000233242 DNAAF3Q8N9W5 541 aa8.78□□□□□ -1
APOB-201ENST00000233242 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
APOB-201ENST00000233242 ATP6V1E2Q96A05 226 aa8.78□□□□□ -1
APOB-201ENST00000233242 LRRN2O75325 713 aa8.78□□□□□ -1
APOB-201ENST00000233242 HOMEZQ8IX15 550 aa8.78□□□□□ -1
APOB-201ENST00000233242 ZNF229Q9UJW7 825 aa8.78□□□□□ -1
APOB-201ENST00000233242 TMOD1P28289 359 aa8.78□□□□□ -1
APOB-201ENST00000233242 TFDP2Q14188 446 aa8.78□□□□□ -1
APOB-201ENST00000233242 KCNB1Q14721 858 aa8.78□□□□□ -1
APOB-201ENST00000233242 FAM83BQ5T0W9 1011 aa8.78□□□□□ -1
APOB-201ENST00000233242 DDI1Q8WTU0 396 aa8.78□□□□□ -1
APOB-201ENST00000233242 XPO6Q96QU8 1125 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 AMNQ9BXJ7 453 aa8.78□□□□□ -1
APOB-201ENST00000233242 PCDHB6Q9Y5E3 794 aa8.78□□□□□ -1
APOB-201ENST00000233242 TFDP1Q14186 410 aa8.78□□□□□ -1
APOB-201ENST00000233242 CFAP69A5D8W1 941 aa8.78□□□□□ -1
APOB-201ENST00000233242 GOLGA8MH3BSY2 632 aa8.78□□□□□ -1
APOB-201ENST00000233242 NR5A1Q13285 461 aa8.78□□□□□ -1
APOB-201ENST00000233242 NAA30Q147X3 362 aaPredicted RBP8.78□□□□□ -1
APOB-201ENST00000233242 RFFLQ8WZ73 363 aa8.78□□□□□ -1
APOB-201ENST00000233242 EEF2KMTQ96G04 330 aa8.78□□□□□ -1
APOB-201ENST00000233242 ATP6V0A4Q9HBG4 840 aa8.78□□□□□ -1
APOB-201ENST00000233242 STRIP2Q9ULQ0 834 aa8.78□□□□□ -1
APOB-201ENST00000233242 TSC22D4Q9Y3Q8 395 aa8.78□□□□□ -1
APOB-201ENST00000233242 DDB1Q16531 1140 aa8.77□□□□□ -1
APOB-201ENST00000233242 MMGT1Q8N4V1 131 aa8.77□□□□□ -1
APOB-201ENST00000233242 VHLP40337 213 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 MRPS25P82663 173 aaKnown RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 TTC37Q6PGP7 1564 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 COPS2P61201 443 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 SEPT8Q92599 483 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 KCNK16Q96T55 309 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 AP4S1Q9Y587 144 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 LRRC53A6NM62 1247 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 OATP04181 439 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 PTGISQ16647 500 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 NSMFQ6X4W1 530 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 DCTN4Q9UJW0 460 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 SLC4A7Q9Y6M7 1214 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 A0A087WWV3 80 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 SSU72P8A0A1W2PR75 194 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 ASAP2O43150 1006 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 H2AFXP16104 143 aaPredicted RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 SERPINB3P29508 390 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 DEFA1P59665 94 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 DEFA3P59666 94 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 ITIH4Q14624 930 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 SMAPO00193 183 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 XPOTO43592 962 aaKnown RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 KDM7AQ6ZMT4 941 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 CMTM5Q96DZ9 223 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 COPG1Q9Y678 874 aaKnown RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 MAGEA13PA6NCF6 341 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 F8W8V4 182 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 KLHL2O95198 593 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 MYCNP04198 464 aaPredicted RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 PAMP19021 973 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 INPP5AQ14642 412 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 E2F6O75461 281 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 PLA2G4BP0C869 781 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 RPS6KC1Q96S38 1066 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 MTO1Q9Y2Z2 717 aaKnown RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 DTNBO60941 627 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 TMEM154Q6P9G4 183 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 MCUQ8NE86 351 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 MAGI2Q86UL8 1455 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 STRNO43815 780 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 ACBD5Q5T8D3 534 aaPredicted RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 KSR1Q8IVT5 923 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 RIBC1Q8N443 379 aaPredicted RBP8.77□□□□□ -1.01
APOB-201ENST00000233242 PBXIP1Q96AQ6 731 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 GINM1Q9NU53 330 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1.01
APOB-201ENST00000233242 H3BRJ5 948 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 M0R2C6 588 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ATP1A1P05023 1023 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 TRIP13Q15645 432 aaPredicted RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 TRIM59Q8IWR1 403 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ELOA2Q8IYF1 753 aaPredicted RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 JDP2Q8WYK2 163 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ZFATQ9P243 1243 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 FAM47DPA6NHR8 397 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 PIK3R2O00459 728 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TMCC1O94876 653 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 PABPC4Q13310 644 aaKnown RBP eCLIP8.76□□□□□ -1.01
APOB-201ENST00000233242 HDAC6Q9UBN7 1215 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TTC26A0AVF1 554 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TRIM72Q6ZMU5 477 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 KIF2CQ99661 725 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ASPSCR1Q9BZE9 553 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 GOLPH3LQ9H4A5 285 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 NRBP2Q9NSY0 501 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 LPXNO60711 386 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms