RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Klc1O88447 541 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Traf5P70191 558 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 EsrrbQ61539 433 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Kif5bQ61768 963 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cplx4Q80WM3 160 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 MslnlQ8C160 685 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ctnnbl1Q9CWL8 563 aaKnown RBP14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cfap57Q9D180 1249 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Drap1Q9D6N5 205 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 IvdQ9JHI5 424 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ifi202Q9R002 445 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Mtmr2Q9Z2D1 643 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Plxnb2B2RXS4 1842 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Col2a1P28481 1487 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Nova2D3YVV7 556 aaKnown RBP14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Trappc3O55013 180 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 OatP29758 439 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Cacnb3P54285 484 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ddx49Q4FZF3 480 aaKnown RBP14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 CrkQ64010 304 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Iws1Q8C1D8 766 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Dcaf8Q8N7N5 591 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Dph5Q9CWQ0 281 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Acsl3Q9CZW4 720 aaKnown RBP14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fam111aQ9D2L9 613 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Grtp1Q9D3N8 359 aa14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Pabpc6Q9D4E6 643 aaKnown RBP14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Edf1Q9JMG1 148 aaKnown RBP14.02□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fbf1A2A870 1173 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gm2030D3Z7C4 212 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Sclt1G5E861 688 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 PtenO08586 403 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 InhbeO08717 350 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 AoahO35298 574 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Rad51bO35719 350 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Tp53P02340 387 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ccdc33Q3ULW6 985 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Atp13a4Q5XF90 1193 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Hoxa13Q62424 386 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Efcab14Q8BGQ6 484 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Vps52Q8C754 723 aaKnown RBP14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 PpatQ8CIH9 517 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Coa7Q921H9 231 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gps2Q921N8 327 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Phtf1Q9QZ09 761 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Prdm11A2AGX3 565 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 R3hdm1E9Q9Q2 1135 aaKnown RBP14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 CraddO88843 199 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Tmod1P49813 359 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 KhsrpQ3U0V1 748 aaKnown RBP14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Tatdn3Q3U1C6 294 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Znf583Q3V080 568 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Nt5c2Q3V1L4 560 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Znf354cQ571J5 560 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Nr2e1Q64104 385 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 SpidrQ8BGX7 933 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Emilin2Q8K482 1074 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 SfpqQ8VIJ6 699 aaKnown RBP14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Havcr2Q8VIM0 281 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gmcl1Q920G9 524 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 BcamQ9R069 622 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Lypla2Q9WTL7 231 aa14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 IkQ9Z1M8 557 aaKnown RBP14.01□□□□□ -0.17
Nup88-203ENSMUST00000108531 Col1a1P11087 1453 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gm45261A0A1B0GSP6 197 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ace3D0G895 737 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Zc3h7bF8VPP8 982 aaKnown RBP14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Gm8298J3QPI0 401 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Stk10O55098 966 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 DtnbO70585 659 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ercc5P35689 1170 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 MagohP61327 146 aaKnown RBP14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Kctd16Q5DTY9 427 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Scarf1Q5ND28 820 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Kiaa1211Q5PR69 1207 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 GmipQ6PGG2 971 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 CnstQ8CBC4 711 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fermt3Q8K1B8 665 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 CpzQ8R4V4 654 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 4930550L24RikQ99PA7 320 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 MagohbQ9CQL1 146 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Eid1Q9DCR4 169 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Stk4Q9JI11 487 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 SynrgQ5SV85 1306 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Chmp6P0C0A3 200 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Atp8a1P70704 1164 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ndufaf2Q59J78 168 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Serpinb6Q60854 378 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ppp2r5eQ61151 467 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Adgrg6Q6F3F9 1165 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Fmnl3Q6ZPF4 1028 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Ece2Q80Z60 881 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Bcas3Q8CCN5 928 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Atxn7Q8R4I1 867 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Slc35f6Q8VE96 372 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Abcf2Q99LE6 628 aaKnown RBP14□□□□□ -0.17
Nup88-203ENSMUST00000108531 PdhbQ9D051 359 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Pramef12Q9D2F1 463 aa14□□□□□ -0.17
Nup88-203ENSMUST00000108531 Proca1B0QZF7 307 aa13.99□□□□□ -0.17
Nup88-203ENSMUST00000108531 Hsf3D0VYS2 492 aa13.99□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms