RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Per2O54943 1257 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Hoxc10P31257 342 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Actn4P57780 912 aaKnown RBP17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 BC051142Q3V0M8 400 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Tbx18Q9EPZ6 613 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Cog1Q9Z160 980 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Igsf9bE9PZ19 1328 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Tsta3P23591 321 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 CtshP49935 333 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Vars2Q3U2A8 1060 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Zbtb16Q3UQ17 673 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Prl2c1Q5SVL9 228 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 P2ry10Q8BFU7 328 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Ccdc68Q8BVC4 333 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Apol7cQ8C6E1 369 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 CbsQ91WT9 561 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Tlr3Q99MB1 905 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 1700109H08RikQ9D9C0 210 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 EcsitQ9QZH6 435 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Prr7Q3V0I2 269 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Ttf2Q5NC05 1138 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Grm4Q68EF4 912 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Bbs7Q8K2G4 715 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Prpsap2Q8R574 369 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Mrps22Q9CXW2 359 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Hebp1Q9R257 190 aa17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Twf2Q9Z0P5 349 aaKnown RBP17.06■□□□□ 0.32
Ret-202ENSMUST00000088790 Slit3Q9WVB4 1523 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 P01734 135 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Fam81aQ3UXZ6 364 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Atxn2lQ7TQH0 1049 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Atxn7Q8R4I1 867 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 AticQ9CWJ9 592 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Fxr2Q9WVR4 673 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Gipc1Q9Z0G0 333 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Aldh18a1Q9Z110 795 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 1700003F12RikA2AKE5 210 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Krt36B1AQ75 473 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Lrrc4bP0C192 709 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Skap2Q3UND0 358 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Srrm1Q52KI8 946 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Gm2163Q6PCY5 473 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Trub2Q91WG3 331 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 CtsqQ91ZF4 343 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Sh2d4bA6X942 431 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Serpina3iD3Z450 408 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Tmem232Q5K6N0 675 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Mrps31Q61733 384 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Mysm1Q69Z66 819 aa17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Rpf1Q7TND5 349 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 Rpf2Q9JJ80 306 aaKnown RBP17.05■□□□□ 0.32
Ret-202ENSMUST00000088790 JrklB2RRL2 523 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Plekhf1Q3TB82 279 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Cnga4Q3UW12 575 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Pja2Q80U04 707 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Wdr27Q8C5V5 780 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Slc44a4Q91VA1 707 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Tmem131lQ3U3D7 1597 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Ift81O35594 676 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Rhbdl3P58873 404 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Prr18Q6PAN7 307 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Asnsd1Q8BFS9 627 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Rcn2Q8BP92 320 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Gtpbp10Q8K013 366 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Tdrd3Q91W18 743 aaKnown RBP17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Tspan17Q9D7W4 270 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Sept6Q9R1T4 434 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Adam22Q9R1V6 904 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Pacsin2Q9WVE8 486 aaKnown RBP17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Cdk5rap2Q8K389 1822 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Taf4bG5E8Z2 855 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Fgd3O88842 733 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Ptk2P34152 1090 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Pdik1lQ8QZR7 341 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Scrn2Q8VCA8 425 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Lman1lQ8VCD3 505 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Gimap4Q99JY3 219 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Xab2Q9DCD2 855 aaKnown RBP17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Gm21962L7N280 338 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Cd72P21855 354 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Mgat1P27808 447 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Pth1rP41593 591 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 HelqQ2VPA6 1069 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Tatdn3Q3U1C6 294 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Usp13Q5BKP2 858 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Scfd2Q8BTY8 684 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Lrit1Q8K099 624 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Chn1Q91V57 459 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Nmrk1Q91W63 195 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Ranbp17Q99NF8 1088 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 Stk32bQ9JJX8 414 aa17.04■□□□□ 0.32
Ret-202ENSMUST00000088790 D1Pas1P16381 660 aa17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Fen1P39749 378 aa17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Rasa2P58069 847 aa17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Rasip1Q3U0S6 961 aa17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Gm14685Q52KH6 695 aa17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Actn1Q7TPR4 892 aaKnown RBP17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Klhl29Q80T74 875 aa17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Clasp2Q8BRT1 1286 aaKnown RBP17.03■□□□□ 0.32
Ret-202ENSMUST00000088790 Tube1Q9D6T1 475 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms