RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	KKQ8	P36004	724 aa		4.65	□□□□□ -1.67
COT1	YOR316C	TEF4	P36008	412 aa	Known RBP	4.65	□□□□□ -1.67
COT1	YOR316C	MRPL36	P36531	177 aa		4.65	□□□□□ -1.67
COT1	YOR316C	YCR087C-A	P37263	153 aa		4.65	□□□□□ -1.67
COT1	YOR316C	YBR139W	P38109	508 aa		4.65	□□□□□ -1.67
COT1	YOR316C	RRN10	P38204	145 aa		4.65	□□□□□ -1.67
COT1	YOR316C	RPS27B	P38711	82 aa		4.65	□□□□□ -1.67
COT1	YOR316C	MET18	P40469	1032 aa		4.65	□□□□□ -1.67
COT1	YOR316C	CAB2	P40506	365 aa		4.65	□□□□□ -1.67
COT1	YOR316C	FKH2	P41813	862 aa		4.65	□□□□□ -1.67
COT1	YOR316C	COS4	P43542	379 aa		4.65	□□□□□ -1.67
COT1	YOR316C	SSY5	P47002	699 aa		4.65	□□□□□ -1.67
COT1	YOR316C	BUL1	P48524	976 aa		4.65	□□□□□ -1.67
COT1	YOR316C	NAS6	P50086	228 aa		4.65	□□□□□ -1.67
COT1	YOR316C	ERG26	P53199	349 aa	Known RBP	4.65	□□□□□ -1.67
COT1	YOR316C	CUS2	P53830	285 aa	Predicted RBP	4.65	□□□□□ -1.67
COT1	YOR316C	GOR1	P53839	350 aa		4.65	□□□□□ -1.67
COT1	YOR316C	YNL140C	P53910	189 aa		4.65	□□□□□ -1.67
COT1	YOR316C	YNL010W	P53981	241 aa	Known RBP	4.65	□□□□□ -1.67
COT1	YOR316C	GAS3	Q03655	524 aa		4.65	□□□□□ -1.67
COT1	YOR316C	MUS81	Q04149	632 aa	Predicted RBP	4.65	□□□□□ -1.67
COT1	YOR316C	ROY1	Q04847	553 aa		4.65	□□□□□ -1.67
COT1	YOR316C	NGL1	Q08213	363 aa	Known RBP	4.65	□□□□□ -1.67
COT1	YOR316C	YOR376W	Q08900	122 aa		4.65	□□□□□ -1.67
COT1	YOR316C	PUS9	Q12069	462 aa		4.65	□□□□□ -1.67
COT1	YOR316C	BAG7	Q12128	409 aa		4.65	□□□□□ -1.67
COT1	YOR316C	NMD4	Q12129	218 aa		4.65	□□□□□ -1.67
COT1	YOR316C	MHT1	Q12525	324 aa		4.65	□□□□□ -1.67
COT1	YOR316C	YCL012C	Q8J0M4	134 aa		4.65	□□□□□ -1.67
COT1	YOR316C	FAS1	P07149	2051 aa	Known RBP	4.65	□□□□□ -1.67
COT1	YOR316C	EXO70	P19658	623 aa		4.64	□□□□□ -1.67
COT1	YOR316C	PRP4	P20053	465 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	SGV1	P23293	657 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	OAR1	P35731	278 aa		4.64	□□□□□ -1.67
COT1	YOR316C	ASC1	P38011	319 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	YBR062C	P38239	180 aa		4.64	□□□□□ -1.67
COT1	YOR316C	OM14	P38325	134 aa		4.64	□□□□□ -1.67
COT1	YOR316C	ARN1	P38731	627 aa		4.64	□□□□□ -1.67
COT1	YOR316C	YDR089W	P38966	869 aa		4.64	□□□□□ -1.67
COT1	YOR316C	MET30	P39014	640 aa		4.64	□□□□□ -1.67
COT1	YOR316C	FRT2	P39734	528 aa		4.64	□□□□□ -1.67
COT1	YOR316C	PZF1	P39933	429 aa		4.64	□□□□□ -1.67
COT1	YOR316C	ARB1	P40024	610 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	BAP3	P41815	604 aa		4.64	□□□□□ -1.67
COT1	YOR316C	IRC5	P43610	853 aa		4.64	□□□□□ -1.67
COT1	YOR316C	STB2	P46679	850 aa		4.64	□□□□□ -1.67
COT1	YOR316C	GTO1	P48239	356 aa		4.64	□□□□□ -1.67
COT1	YOR316C	MTR3	P48240	250 aa	Predicted RBP	4.64	□□□□□ -1.67
COT1	YOR316C	YPT32	P51996	222 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	SDT1	P53078	280 aa		4.64	□□□□□ -1.67
COT1	YOR316C	PRP38	Q00723	242 aa	Predicted RBP	4.64	□□□□□ -1.67
COT1	YOR316C	AAT1	Q01802	451 aa		4.64	□□□□□ -1.67
COT1	YOR316C	RNY1	Q02933	434 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	ECM11	Q04110	302 aa		4.64	□□□□□ -1.67
COT1	YOR316C	SNO4	Q04902	237 aa		4.64	□□□□□ -1.67
COT1	YOR316C	CRR1	Q05790	422 aa		4.64	□□□□□ -1.67
COT1	YOR316C	FAR10	Q06001	478 aa		4.64	□□□□□ -1.67
COT1	YOR316C	HSP33	Q08914	237 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	HSP32	Q08992	237 aa		4.64	□□□□□ -1.67
COT1	YOR316C	GET4	Q12125	312 aa		4.64	□□□□□ -1.67
COT1	YOR316C	YPL245W	Q12179	454 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	RTN2	Q12443	393 aa		4.64	□□□□□ -1.67
COT1	YOR316C	PAR32	Q12515	295 aa	Known RBP	4.64	□□□□□ -1.67
COT1	YOR316C	YOR032W-A	Q8TGS1	66 aa		4.64	□□□□□ -1.67
COT1	YOR316C	YBR182C-A	Q8TGU6	64 aa		4.64	□□□□□ -1.67
COT1	YOR316C	Q0010	Q9ZZX9	128 aa		4.64	□□□□□ -1.67
COT1	YOR316C	HXK2	P04807	486 aa	Known RBP	4.63	□□□□□ -1.67
COT1	YOR316C	TRX3	P25372	127 aa		4.63	□□□□□ -1.67
COT1	YOR316C	MXR2	P25566	168 aa		4.63	□□□□□ -1.67
COT1	YOR316C	YIM1	P28625	365 aa		4.63	□□□□□ -1.67
COT1	YOR316C	FRE2	P36033	711 aa		4.63	□□□□□ -1.67
COT1	YOR316C	MAL32	P38158	584 aa		4.63	□□□□□ -1.67
COT1	YOR316C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
COT1	YOR316C	VPS41	P38959	992 aa		4.63	□□□□□ -1.67
COT1	YOR316C	ASI2	P53895	289 aa		4.63	□□□□□ -1.67
COT1	YOR316C	IDP3	P53982	420 aa	Known RBP	4.63	□□□□□ -1.67
COT1	YOR316C	MPS1	P54199	764 aa		4.63	□□□□□ -1.67
COT1	YOR316C	REX2	P54964	269 aa	Known RBP	4.63	□□□□□ -1.67
COT1	YOR316C	TIM11	P81449	96 aa	Predicted RBP	4.63	□□□□□ -1.67
COT1	YOR316C	RPM2	Q02773	1202 aa		4.63	□□□□□ -1.67
COT1	YOR316C	YLR413W	Q06689	675 aa		4.63	□□□□□ -1.67
COT1	YOR316C	REX3	Q12090	404 aa		4.63	□□□□□ -1.67
COT1	YOR316C	MDM32	Q12171	622 aa		4.63	□□□□□ -1.67
COT1	YOR316C	SAS5	Q99314	248 aa		4.63	□□□□□ -1.67
COT1	YOR316C	STE7	P06784	515 aa		4.62	□□□□□ -1.67
COT1	YOR316C	TRP4	P07285	380 aa	Predicted RBP	4.62	□□□□□ -1.67
COT1	YOR316C	RPC40	P07703	335 aa	Known RBP	4.62	□□□□□ -1.67
COT1	YOR316C	YMR085W	P0CF18	432 aa		4.62	□□□□□ -1.67
COT1	YOR316C	OCA4	P25366	362 aa		4.62	□□□□□ -1.67
COT1	YOR316C	CHA1	P25379	360 aa	Known RBP	4.62	□□□□□ -1.67
COT1	YOR316C	PHO91	P27514	894 aa		4.62	□□□□□ -1.67
COT1	YOR316C	PUP2	P32379	260 aa		4.62	□□□□□ -1.67
COT1	YOR316C	ERG1	P32476	496 aa	Known RBP	4.62	□□□□□ -1.67
COT1	YOR316C	CDC5	P32562	705 aa		4.62	□□□□□ -1.67
COT1	YOR316C	CAF4	P36130	643 aa		4.62	□□□□□ -1.67
COT1	YOR316C	APT2	P36973	181 aa		4.62	□□□□□ -1.67
COT1	YOR316C	YBR138C	P38277	524 aa		4.62	□□□□□ -1.67
COT1	YOR316C	TDA11	P38854	504 aa		4.62	□□□□□ -1.67
COT1	YOR316C	YIL001W	P40560	513 aa		4.62	□□□□□ -1.67
COT1	YOR316C	YJL055W	P47044	245 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms