RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C RIM15P43565 1770 aa2.98□□□□□ -1.93
RPN1YHR027C RPP1BP10622 106 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C ERG9P29704 444 aa2.98□□□□□ -1.93
RPN1YHR027C APL3P38065 1025 aa2.98□□□□□ -1.93
RPN1YHR027C BIT2P38346 545 aa2.98□□□□□ -1.93
RPN1YHR027C PCM1P38628 557 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C PPE1P38796 400 aa2.98□□□□□ -1.93
RPN1YHR027C FAD1P38913 306 aa2.98□□□□□ -1.93
RPN1YHR027C PAN6P40459 309 aa2.98□□□□□ -1.93
RPN1YHR027C PRM10P42946 383 aa2.98□□□□□ -1.93
RPN1YHR027C CLA4P48562 842 aa2.98□□□□□ -1.93
RPN1YHR027C YGL185CP53100 379 aa2.98□□□□□ -1.93
RPN1YHR027C NSA1P53136 463 aaPredicted RBP2.98□□□□□ -1.93
RPN1YHR027C GND2P53319 492 aa2.98□□□□□ -1.93
RPN1YHR027C ERV29P53337 310 aa2.98□□□□□ -1.93
RPN1YHR027C YNL181WP53878 407 aa2.98□□□□□ -1.93
RPN1YHR027C ERV25P54837 211 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C MSC1Q03104 513 aa2.98□□□□□ -1.93
RPN1YHR027C TRM12Q04235 462 aa2.98□□□□□ -1.93
RPN1YHR027C DFG5Q05031 458 aa2.98□□□□□ -1.93
RPN1YHR027C RIF2Q06208 395 aa2.98□□□□□ -1.93
RPN1YHR027C MRI1Q06489 411 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C HDA2Q06629 674 aa2.98□□□□□ -1.93
RPN1YHR027C YDL057WQ07379 328 aa2.98□□□□□ -1.93
RPN1YHR027C YOR365CQ08844 703 aa2.98□□□□□ -1.93
RPN1YHR027C KEL3Q08979 651 aaPredicted RBP2.98□□□□□ -1.93
RPN1YHR027C YDR018CQ12185 396 aa2.98□□□□□ -1.93
RPN1YHR027C DFR1P07807 211 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
RPN1YHR027C PRB1P09232 635 aa2.98□□□□□ -1.93
RPN1YHR027C REV1P12689 985 aa2.98□□□□□ -1.93
RPN1YHR027C HOP1P20050 605 aa2.98□□□□□ -1.93
RPN1YHR027C MAK31P23059 88 aa2.98□□□□□ -1.93
RPN1YHR027C RHB1P25378 209 aa2.98□□□□□ -1.93
RPN1YHR027C DCC1P25559 380 aa2.98□□□□□ -1.93
RPN1YHR027C VAC17P25591 423 aa2.98□□□□□ -1.93
RPN1YHR027C ACB1P31787 87 aa2.98□□□□□ -1.93
RPN1YHR027C NRP1P32770 719 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
RPN1YHR027C WBP1P33767 430 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C CSG2P35206 410 aa2.98□□□□□ -1.93
RPN1YHR027C FRE2P36033 711 aa2.98□□□□□ -1.93
RPN1YHR027C SNU114P36048 1008 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C IRS4P36115 615 aaKnown RBP2.98□□□□□ -1.93
RPN1YHR027C ATG12P38316 186 aa2.98□□□□□ -1.93
RPN1YHR027C PRE3P38624 215 aa2.98□□□□□ -1.93
RPN1YHR027C TMA108P40462 946 aa2.98□□□□□ -1.93
RPN1YHR027C ARF3P40994 183 aaRIP-Chip data2.98□□□□□ -1.93not detected
RPN1YHR027C RPA34P47006 233 aaPredicted RBP2.98□□□□□ -1.93
RPN1YHR027C AIM22P47051 409 aa2.98□□□□□ -1.93
RPN1YHR027C MCM22P47167 239 aa2.98□□□□□ -1.93
RPN1YHR027C YJR154WP47181 346 aa2.98□□□□□ -1.93
RPN1YHR027C ASK10P48361 1146 aa2.98□□□□□ -1.93
RPN1YHR027C YDL183CP48569 320 aa2.98□□□□□ -1.93
RPN1YHR027C SOL1P50278 321 aa2.98□□□□□ -1.93
RPN1YHR027C YGL159WP53110 370 aa2.98□□□□□ -1.93
RPN1YHR027C YDR248CQ03786 193 aa2.98□□□□□ -1.93
RPN1YHR027C MSC3Q05812 728 aa2.98□□□□□ -1.93
RPN1YHR027C MFG1Q07684 458 aa2.98□□□□□ -1.93
RPN1YHR027C LDB18Q07887 179 aa2.98□□□□□ -1.93
RPN1YHR027C RRG7Q08774 242 aaPredicted RBP2.98□□□□□ -1.93
RPN1YHR027C RGS2Q99188 309 aa2.98□□□□□ -1.93
RPN1YHR027C MTR10Q99189 972 aa2.98□□□□□ -1.93
RPN1YHR027C FSH3Q99369 266 aa2.98□□□□□ -1.93
RPN1YHR027C HKR1P41809 1802 aa2.98□□□□□ -1.93
RPN1YHR027C PRC1P00729 532 aa2.97□□□□□ -1.93
RPN1YHR027C AI1P03875 834 aa2.97□□□□□ -1.93
RPN1YHR027C AI3P03877 415 aa2.97□□□□□ -1.93
RPN1YHR027C RHO2P06781 192 aa2.97□□□□□ -1.93
RPN1YHR027C ALG7P07286 448 aa2.97□□□□□ -1.93
RPN1YHR027C SEC12P11655 471 aa2.97□□□□□ -1.93
RPN1YHR027C FUN14P18411 198 aa2.97□□□□□ -1.93
RPN1YHR027C SNF6P18888 332 aa2.97□□□□□ -1.93
RPN1YHR027C MNE1P24720 663 aa2.97□□□□□ -1.93
RPN1YHR027C SPS19P32573 292 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C PIN4P34217 668 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
RPN1YHR027C TVP38P36164 337 aa2.97□□□□□ -1.93
RPN1YHR027C ROT2P38138 954 aa2.97□□□□□ -1.93
RPN1YHR027C SRO77P38163 1010 aa2.97□□□□□ -1.93
RPN1YHR027C ATG8P38182 117 aaRIP-Chip data2.97□□□□□ -1.93not detected
RPN1YHR027C RRN10P38204 145 aa2.97□□□□□ -1.93
RPN1YHR027C FMO1P38866 432 aa2.97□□□□□ -1.93
RPN1YHR027C MNL1P38888 796 aa2.97□□□□□ -1.93
RPN1YHR027C ICP55P40051 511 aa2.97□□□□□ -1.93
RPN1YHR027C LCB2P40970 561 aa2.97□□□□□ -1.93
RPN1YHR027C NIT2P47016 307 aa2.97□□□□□ -1.93
RPN1YHR027C TAH11P47112 604 aa2.97□□□□□ -1.93
RPN1YHR027C YML6P51998 286 aa2.97□□□□□ -1.93
RPN1YHR027C YGL204CP53089 101 aa2.97□□□□□ -1.93
RPN1YHR027C SKY1Q03656 742 aa2.97□□□□□ -1.93
RPN1YHR027C ATC1Q04005 294 aa2.97□□□□□ -1.93
RPN1YHR027C SHH3Q04487 196 aa2.97□□□□□ -1.93
RPN1YHR027C SEC13Q04491 297 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C YPR127WQ06494 345 aa2.97□□□□□ -1.93
RPN1YHR027C GPI11Q06636 219 aa2.97□□□□□ -1.93
RPN1YHR027C ECM30Q06673 1274 aa2.97□□□□□ -1.93
RPN1YHR027C RRT8Q08219 342 aa2.97□□□□□ -1.93
RPN1YHR027C MED7Q08278 222 aa2.97□□□□□ -1.93
RPN1YHR027C CSM4Q08955 156 aa2.97□□□□□ -1.93
RPN1YHR027C EFG1Q3E705 233 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C CDC42P19073 191 aa2.97□□□□□ -1.93
RPN1YHR027C PRE9P23638 258 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 160.9 ms