RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B YEL043WP32618 956 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B SEC66P33754 206 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B EGD2P38879 174 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B BTT1P40314 149 aaPredicted RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B MET18P40469 1032 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B STR3P53101 465 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B YMR209CQ03648 457 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B PDR5P33302 1511 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B CMD1P06787 147 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B FUS3P16892 353 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B STE50P25344 346 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RRP7P25368 297 aaPredicted RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B GPI10P30777 616 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B SRP102P36057 244 aaPredicted RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B YBR225WP38321 900 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YKE4P40544 346 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B TFG2P41896 400 aaPredicted RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B DLD2P46681 530 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B YJL132WP47014 750 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B JAC1P53193 184 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YGR042WP53227 271 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RHO3Q00245 231 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B RMI1Q02685 241 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B TAF12Q03761 539 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B HCR1Q05775 265 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B SKG3Q06315 1026 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YPR078CQ06813 372 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B ALE1Q08548 619 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B COX17Q12287 69 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RAD6P06104 172 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B SSA3P09435 649 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B OM45P16547 393 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B SGF29P25554 259 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B DCC1P25559 380 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YCL049CP25577 312 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B BUD2P33314 1104 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B COS9P36034 407 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B FIG1P38224 298 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B STB5P38699 743 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RGI2P40188 164 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B MEP1P40260 492 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B ATM1P40416 690 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B DFG10P40526 253 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YNL320WP42840 284 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B TRS85P46944 698 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B ECM27P47144 725 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B AAD10P47182 288 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B NSA1P53136 463 aaPredicted RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B YGR126WP53274 230 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B ARE2P53629 642 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B BOR1P53838 576 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YNL234WP53857 426 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B SMA1Q02651 245 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RLI1Q03195 608 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B NHP10Q03435 203 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B SCS7Q03529 384 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B PSY3Q12318 242 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B STH1P32597 1359 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YRF1-3P0CX14 1859 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YRF1-7P0CX15 1859 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YRF1-6P53819 1859 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B HPR1P17629 752 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B RPL5P26321 297 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B ACB1P31787 87 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RIM2P38127 377 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B ECM34P38728 170 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B MLH1P38920 769 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B VPS52P39904 641 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B AVT2P39981 480 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B RIO2P40160 425 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B PHB1P40961 287 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B DIM1P41819 318 aaKnown RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B CAK1P43568 368 aaPredicted RBP1.49□□□□□ -2.17
YGR109W-BYGR109W-B SWC4P53201 476 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YGR079WP53249 370 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B ACS1Q01574 713 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YDR391CQ04170 232 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B UBX2Q04228 584 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B YLL056CQ12177 298 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B PSK1P31374 1356 aa1.49□□□□□ -2.17
YGR109W-BYGR109W-B NUP192P47054 1683 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RAD1P06777 1100 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B DST1P07273 309 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B RPS28BP0C0X0 67 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B UBC1P21734 215 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B YCK1P23291 538 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B CPR3P25719 182 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B SAC1P32368 623 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B DAL3P32459 195 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B STB6P36085 766 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B EXO84P38261 753 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B ISC1P40015 477 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B TOM22P49334 152 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B BRR6P53062 197 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B YGL039WP53183 348 aaKnown RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B SLX9P53251 210 aaPredicted RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B PXR1P53335 271 aaPredicted RBP1.48□□□□□ -2.17
YGR109W-BYGR109W-B NOP13P53883 403 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
YGR109W-BYGR109W-B MUB1Q03162 620 aa1.48□□□□□ -2.17
YGR109W-BYGR109W-B EMI2Q04409 500 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms